| A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa BT Hofmeister, J Denkena, M Colomé-Tatché, Y Shahryary, R Hazarika, ... Genome Biology 21, 1-27, 2020 | 83 | 2020 |
| Epimutations are associated with CHROMOMETHYLASE 3-induced de novo DNA methylation JM Wendte, Y Zhang, L Ji, X Shi, RR Hazarika, Y Shahryary, F Johannes, ... elife 8, e47891, 2019 | 66 | 2019 |
| AlphaBeta: computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants Y Shahryary, A Symeonidi, RR Hazarika, J Denkena, T Mubeen, ... Genome biology 21, 1-22, 2020 | 29 | 2020 |
| MethylStar: A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing data Y Shahryary, RR Hazarika, F Johannes BMC genomics 21, 1-8, 2020 | 16 | 2020 |
| The somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa BT Hofmeister, J Denkena, M Colomé-Tatché, Y Shahryary, R Hazarika, ... BioRxiv, 862623, 2019 | 3 | 2019 |
| GenomicLinks: Deep learning predictions of 3D chromatin loops in the maize genome L Schlegel, R Bhardwaj, Y Shahryary, D Demirtürk, AP Marand, ... bioRxiv, 2024.05. 06.592633, 2024 | | 2024 |
| MethylStar: A fast and robust pipeline for high-throughput analysis of bulk or single-cell WGBS data Y Shahryary, RR Hazarika, F Johannes | | |
