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Zhenjia Wang
Zhenjia Wang
Foundation Medicine
Verified email at foundationmedicine.com
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Year
UTX condensation underlies its tumour-suppressive activity
B Shi, W Li, Y Song, Z Wang, R Ju, A Ulman, J Hu, F Palomba, Y Zhao, ...
Nature 597 (7878), 726-731, 2021
1072021
BART: a transcription factor prediction tool with query gene sets or epigenomic profiles
Z Wang, M Civelek, CL Miller, NC Sheffield, MJ Guertin, C Zang
Bioinformatics 34 (16), 2867-2869, 2018
1032018
Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation
C Fang, Z Wang, C Han, SL Safgren, KA Helmin, ER Adelman, V Serafin, ...
Genome biology 21, 1-30, 2020
792020
UniBic: Sequential row-based biclustering algorithm for analysis of gene expression data
Z Wang, G Li, RW Robinson, X Huang
Scientific reports 6 (1), 23466, 2016
622016
The impacts of read length and transcriptome complexity for de novo assembly: a simulation study
Z Chang, Z Wang, G Li
PloS one 9 (4), e94825, 2014
582014
Genetic ablation of Pim1 or pharmacologic inhibition with TP-3654 ameliorates myelofibrosis in murine models
A Dutta, D Nath, Y Yang, BT Le, MFU Rahman, P Faughnan, Z Wang, ...
Leukemia 36 (3), 746-759, 2022
282022
Nickel-induced transcriptional changes persist post exposure through epigenetic reprogramming
CC Jose, Z Wang, VS Tanwar, X Zhang, C Zang, S Cuddapah
Epigenetics & Chromatin 12, 1-15, 2019
262019
Specific inhibition of DPY30 activity by ASH2L-derived peptides suppresses blood cancer cell growth
KK Shah, RH Whitaker, T Busby, J Hu, B Shi, Z Wang, C Zang, ...
Experimental cell research 382 (2), 111485, 2019
232019
Polyadenylation of histone H3. 1 mRNA promotes cell transformation by displacing H3. 3 from gene regulatory elements
D Chen, QY Chen, Z Wang, Y Zhu, T Kluz, W Tan, J Li, F Wu, L Fang, ...
Iscience 23 (9), 2020
172020
BARTweb: a web server for transcriptional regulator association analysis
W Ma, Z Wang, Y Zhang, NE Magee, Y Feng, R Shi, Y Chen, C Zang
NAR Genomics and Bioinformatics 3 (2), lqab022, 2021
112021
An epilepsy-associated mutation in the nuclear import receptor KPNA7 reduces nuclear localization signal binding
LT Oostdyk, Z Wang, C Zang, H Li, MJ McConnell, BM Paschal
Scientific Reports 10 (1), 4844, 2020
102020
BART3D: Inferring transcriptional regulators associated with differential chromatin interactions from Hi-C data
Z Wang, Y Zhang, C Zang
Bioinformatics 37 (18), 3075-3078, 2021
82021
eMBI: boosting gene expression-based clustering for cancer subtypes
Z Chang, Z Wang, C Ashby, C Zhou, G Li, S Zhang, X Huang
Cancer informatics 13, CIN. S13777, 2014
62014
Fob1-dependent condensin recruitment and loop extrusion on yeast chromosome III
M Dinda, RD Fine, S Saha, Z Wang, C Zang, M Li, JS Smith
PLoS Genetics 19 (4), e1010705, 2023
52023
Integrative analysis of DNA replication origins and ORC-/MCM-binding sites in human cells reveals a lack of overlap
M Tian, Z Wang, Z Su, E Shibata, Y Shibata, A Dutta, C Zang
Elife 12, RP89548, 2024
42024
Assessing acute myeloid leukemia susceptibility in rearrangement‐driven patients by DNA breakage at topoisomerase II and CCCTC‐binding factor/cohesin binding sites
ND Atkin, HM Raimer, Z Wang, C Zang, YH Wang
Genes, Chromosomes and Cancer 60 (12), 808-821, 2021
42021
BART Cancer: a web resource for transcriptional regulators in cancer genomes
ZV Thomas, Z Wang, C Zang
NAR cancer 3 (1), zcab011, 2021
32021
DNA fragility at topologically associated domain boundaries is promoted by alternative DNA secondary structure and topoisomerase II activity
HM Raimer Young, PC Hou, AR Bartosik, ND Atkin, L Wang, Z Wang, ...
Nucleic Acids Research 52 (7), 3837-3855, 2024
2024
DARDN: A deep-learning approach for CTCF binding sequence classification and oncogenic regulatory feature discovery
HJ Cho, Z Wang, Y Cong, S Bekiranov, A Zhang, C Zang
Genes 15 (2), 144, 2024
2024
Loss of CCAAT‐Enhancer Binding Protein Delta Promotes Acute Myeloid Leukemia Cell Proliferation and Survival By Upregulating Cyclin D1 Expression
S Prajapati, C Meydan, R Dillon, N Dunham, H Fan, JA Gandara, T Lee, ...
Blood 142, 1380, 2023
2023
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