| Prodigal: prokaryotic gene recognition and translation initiation site identification D Hyatt, GL Chen, PF LoCascio, ML Land, FW Larimer, LJ Hauser BMC bioinformatics 11, 1-11, 2010 | 8870 | 2010 |
| The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins P Dehal, Y Satou, RK Campbell, J Chapman, B Degnan, A De Tomaso, ... Science 298 (5601), 2157-2167, 2002 | 1844 | 2002 |
| Gene and translation initiation site prediction in metagenomic sequences D Hyatt, PF LoCascio, LJ Hauser, EC Uberbacher Bioinformatics 28 (17), 2223-2230, 2012 | 515 | 2012 |
| Enigmatic, ultrasmall, uncultivated Archaea BJ Baker, LR Comolli, GJ Dick, LJ Hauser, D Hyatt, BD Dill, ML Land, ... Proceedings of the National Academy of Sciences 107 (19), 8806-8811, 2010 | 350 | 2010 |
| Quantitative tracking of isotope flows in proteomes of microbial communities C Pan, CR Fischer, D Hyatt, BP Bowen, RL Hettich, JF Banfield Molecular & Cellular Proteomics 10 (4), 2011 | 98 | 2011 |
| Quality scores for 32,000 genomes ML Land, D Hyatt, SR Jun, GH Kora, LJ Hauser, O Lukjancenko, ... Standards in genomic sciences 9, 1-10, 2014 | 53 | 2014 |
| Defining the genetic components of callus formation: A GWAS approach GA Tuskan, R Mewalal, LE Gunter, KJ Palla, K Carter, DA Jacobson, ... PLoS One 13 (8), e0202519, 2018 | 39 | 2018 |
| Improved analysis and annotation tools for whole-genome computational annotation and analysis: GRAIL-EXP genome analysis toolkit and related analysis tools D Hyatt, J Snoddy, D Schmoyer, G Chen, K Fischer, M Parang, I Vokler, ... Genome Sequencing & Biology Meeting, 2000 | 23 | 2000 |
| Functional phylogenomics analysis of bacteria and archaea using consistent genome annotation with UniFam J Chai, G Kora, TH Ahn, D Hyatt, C Pan BMC evolutionary biology 14, 1-13, 2014 | 22 | 2014 |
| Exhaustive database searching for amino acid mutations in proteomes D Hyatt, C Pan Bioinformatics 28 (14), 1895-1901, 2012 | 21 | 2012 |
| Rex in Caldicellulosiruptor bescii: Novel regulon members and its effect on the production of ethanol and overflow metabolites K Sander, D Chung, D Hyatt, J Westpheling, DM Klingeman, ... MicrobiologyOpen 8 (2), e00639, 2019 | 20 | 2019 |
| Grail EXP and Genome Analysis Pipeline for Genome Annotation EC Uberbacher, D Hyatt, M Shah Current Protocols in Human Genetics 39 (1), 6.5. 1-6.5. 15, 2003 | 12 | 2003 |
| A k-mer based approach for classifying viruses without taxonomy identifies viral associations in human autism and plant microbiomes BJ Garcia, R Simha, M Garvin, A Furches, P Jones, JGFM Gazolla, ... Computational and structural biotechnology journal 19, 5911-5919, 2021 | 11 | 2021 |
| BESC knowledgebase public portal MH Syed, TV Karpinets, M Parang, MR Leuze, BH Park, D Hyatt, ... Bioinformatics 28 (5), 750-751, 2012 | 6 | 2012 |
| Isolation and Whole‐Genome Sequencing of Environmental Campylobacter BR Kelley, JC Ellis, D Hyatt, D Jacobson, J Johnson Current protocols in microbiology 51 (1), e64, 2018 | 5 | 2018 |
| Kraken2 Metagenomic Virus Database BJ Garcia, R Simha, M Garvin, A Furches, P Jones, PD Hyatt, C Schadt, ... Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States). Oak Ridge …, 2020 | 4 | 2020 |
| Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa J Lagergren, M Pavicic, HB Chhetri, LM York, D Hyatt, D Kainer, ... Plant Phenomics 5, 0072, 2023 | 1 | 2023 |
| Few-shot leaf segmentation J Lagergren, M Pavicic, HB Chhetri, LM York, D Hyatt, D Kainer, ... Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States), 2023 | 1 | 2023 |
| Supporting information for" Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa" J Lagergren, M Pavicic, H Chhetri, L York, D Hyatt, D Kainer, EM Rutter, ... Oak Ridge National Lab.(ORNL), Oak Ridge, TN (United States). Oak Ridge …, 2023 | 1 | 2023 |
| A k-mer based approach for virus classification identifies coronavirus infections and viral associations in human and plant microbiomes B Garcia, R Simha, M Garvin, A Furches, P Jones, J Gazolla, PD Hyatt, ... | | 2020 |
