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Julia Olivieri
Julia Olivieri
Assistant Professor of Computer Science, University of the Pacific
Verified email at pacific.edu - Homepage
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Cited by
Cited by
Year
The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans
The Tabula Sapiens Consortium*, RC Jones, J Karkanias, MA Krasnow, ...
Science 376 (6594), eabl4896, 2022
4272022
Molecular mechanism of GPCR-mediated arrestin activation
NR Latorraca, JK Wang, B Bauer, RJL Townshend, SA Hollingsworth, ...
Nature 557 (7705), 452-456, 2018
1972018
Global Biobank Engine: enabling genotype-phenotype browsing for biobank summary statistics
G McInnes, Y Tanigawa, C DeBoever, A Lavertu, JE Olivieri, M Aguirre, ...
Bioinformatics 35 (14), 2495-2497, 2019
972019
From cacti to carnivores: Improved phylotranscriptomic sampling and hierarchical homology inference provide further insight into the evolution of Caryophyllales
JF Walker, Y Yang, T Feng, A Timoneda, J Mikenas, V Hutchison, ...
American Journal of Botany 105 (3), 446-462, 2018
942018
Improved transcriptome sampling pinpoints 26 ancient and more recent polyploidy events in Caryophyllales, including two allopolyploidy events
Y Yang, MJ Moore, SF Brockington, J Mikenas, J Olivieri, JF Walker, ...
New Phytologist 217 (2), 855-870, 2018
922018
Evolution of Portulacineae marked by gene tree conflict and gene family expansion associated with adaptation to harsh environments
N Wang, Y Yang, MJ Moore, SF Brockington, JF Walker, JW Brown, ...
Molecular biology and evolution 36 (1), 112-126, 2019
562019
RNA splicing programs define tissue compartments and cell types at single-cell resolution
JE Olivieri, R Dehghannasiri, PL Wang, SR Jang, A De Morree, SY Tan, ...
Elife 10, e70692, 2021
282021
The SpliZ generalizes ‘percent spliced in’to reveal regulated splicing at single-cell resolution
JE Olivieri, R Dehghannasiri, J Salzman
Nature methods 19 (3), 307-310, 2022
202022
Specific splice junction detection in single cells with SICILIAN
R Dehghannasiri, JE Olivieri, A Damljanovic, J Salzman
Genome Biology 22, 1-13, 2021
172021
Pervasive additive and non-additive effects within the HLA region contribute to disease risk in the UK Biobank
GR Venkataraman, JE Olivieri, C DeBoever, Y Tanigawa, JM Justesen, ...
BioRxiv, 2020.05. 28.119669, 2020
92020
Game-of-Life mosaics
R Bosch, J Olivieri
Proceedings of Bridges 2014: Mathematics, Music, Art, Architecture, Culture …, 2014
32014
Mouse lemur transcriptomic atlas elucidates primate genes, physiology, disease, and evolution
Tabula Microcebus Consortium, C Ezran, S Liu, J Ming, LA Guethlein, ...
bioRxiv, 2022.08. 06.503035, 2022
22022
Designing Game of Life mosaics with integer programming
R Bosch, J Olivieri
Journal of Mathematics and the Arts 8 (3-4), 120-132, 2014
22014
UNVEILING GENE SIMILARITIES THROUGH RNA-SEQ ANALYSIS
AT Choudhry, J Olivieri
2024
Identifying differential and equivalent gene expression between wildtype and FOXC2-deficient melanoma cells
E Chow, J Olivieri
2024
Charting Gene Expression Equivalence in Human Lung Tissue Using the (Two One-Sided Tests) TOST Procedure
O Avalos, J Olivieri
2024
Identification of Differential Gene Expression in Glioma Patients
P Mathur, J Olivieri
2024
Analysis of RNA processing directly from spatial transcriptomics data reveals previously unknown regulation
J Olivieri, J Salzman
bioRxiv, 2023
2023
The SpliZ generalizes' percent spliced in'to reveal regulated splicing at single-cell resolution (vol 19, pg 307, 2022)
JE Olivieri, R Dehghannasiri, J Salzman
NATURE METHODS 19 (5), 628-628, 2022
2022
The Statistics of RNA Splicing in Single Cells
JE Olivieri
Stanford University, 2022
2022
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