Pavel Pevzner
Pavel Pevzner
Professor of Computer Science, University of California at San Diego
Verified email at eng.ucsd.edu
Title
Cited by
Cited by
Year
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing
A Bankevich, S Nurk, D Antipov, AA Gurevich, M Dvorkin, AS Kulikov, ...
Journal of computational biology 19 (5), 455-477, 2012
84672012
Initial sequencing and comparative analysis of the mouse genome
RH Waterston, K Lindblad-Toh, E Birney, J Rogers, JF Abril, P Agarwal, ...
Nature 420 (6915), 520-562, 2002
69372002
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
LDW Hillier, W Miller, E Birney, W Warren, RC Hardison, CP Ponting, ...
Nature 423 (10), 695-777, 2014
22642014
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
RA Gibbs, GM Weinstock, ML Metzker, DM Muzny, EJ Sodergren, ...
Nature 428 (6982), 493-520, 2004
21082004
An Eulerian path approach to DNA fragment assembly
PA Pevzner, H Tang, MS Waterman
Proceedings of the national academy of sciences 98 (17), 9748-9753, 2001
14032001
Transforming cabbage into turnip: polynomial algorithm for sorting signed permutations by reversals
S Hannenhalli, PA Pevzner
Journal of the ACM (JACM) 46 (1), 1-27, 1999
10891999
Computational molecular biology: an algorithmic approach
P Pevzner
MIT press, 2000
9972000
De novo identification of repeat families in large genomes
AL Price, NC Jones, PA Pevzner
Bioinformatics 21 (suppl_1), i351-i358, 2005
9602005
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
M Wang, JJ Carver, VV Phelan, LM Sanchez, N Garg, Y Peng, ...
Nature biotechnology 34 (8), 828-837, 2016
7552016
Combinatorial approaches to finding subtle signals in DNA sequences.
PA Pevzner, SH Sze
ISMB 8, 269-278, 2000
7382000
De Novo Peptide Sequencing via Tandem Mass Spectrometry
V Dančík, TA Addona, KR Clauser, JE Vath, PA Pevzner
Journal of computational biology 6 (3-4), 327-342, 1999
6901999
PepNovo: de novo peptide sequencing via probabilistic network modeling
A Frank, P Pevzner
Analytical chemistry 77 (4), 964-973, 2005
6842005
An introduction to bioinformatics algorithms
NC Jones, PA Pevzner, P Pevzner
MIT press, 2004
6752004
InsPecT: identification of posttranslationally modified peptides from tandem mass spectra
S Tanner, H Shu, A Frank, LC Wang, E Zandi, M Mumby, PA Pevzner, ...
Analytical chemistry 77 (14), 4626-4639, 2005
6552005
Genome rearrangements and sorting by reversals
V Bafna, PA Pevzner
SIAM Journal on Computing 25 (2), 272-289, 1996
6391996
Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps
WJ Murphy, DM Larkin, A Everts-Van Der Wind, G Bourque, G Tesler, ...
science 309 (5734), 613-617, 2005
5772005
Assembling single-cell genomes and mini-metagenomes from chimeric MDA products
S Nurk, A Bankevich, D Antipov, AA Gurevich, A Korobeynikov, A Lapidus, ...
Journal of Computational Biology 20 (10), 714-737, 2013
5682013
metaSPAdes: a new versatile metagenomic assembler
S Nurk, D Meleshko, A Korobeynikov, PA Pevzner
Genome research 27 (5), 824-834, 2017
5612017
How to apply de Bruijn graphs to genome assembly
PEC Compeau, PA Pevzner, G Tesler
Nature biotechnology 29 (11), 987-991, 2011
5562011
Genome-scale evolution: reconstructing gene orders in the ancestral species
G Bourque, PA Pevzner
Genome research 12 (1), 26-36, 2002
5322002
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