Pavel Pevzner

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Alexey GurevichJun. Prof. of Bioinformatics, Helmholtz Inst. for Pharm. Res. Saarland (HIPS) & Saarland UniversityVerified email at helmholtz-hips.de
Dmitry AntipovVisiting fellow, National Institutes of HealthVerified email at spbu.ru
Max A. AlekseyevGeorge Washington UniversityVerified email at gwu.edu
Anton BankevichPSUVerified email at psu.edu
Vineet BafnaProfessor, Computer Science & Engineering, University of California, San DiegoVerified email at cs.ucsd.edu
Sergey NurkSenior Applications Bioinformatician, Oxford Nanopore TechnologiesVerified email at nanoporetech.com
Anton KorobeynikovSaint Petersburg State UniversityVerified email at korobeynikov.info
Andrey PrjibelskiPostdoctoral Researcher @ University of HelsinkiVerified email at helsinki.fi
Son PhamBioTuringVerified email at bioturing.com
Pieter C DorresteinUCSDVerified email at ucsd.edu
Haixu TangProfessor, Indiana UniversityVerified email at indiana.edu
Alla LapidusSt. Petersburg State University; Санкт Петербургский государственный университетVerified email at spbu.ru
Hosein MohimaniAssistant Professor, Computational Biology Department, School of Computer Science, Carnegie MellonVerified email at andrew.cmu.edu
Mikhail KolmogorovStadtman Investigator, National Cancer Institute, NIHVerified email at nih.gov
Nitin GuptaAssociate Professor, Biological Sciences and Bioengineering, Indian Institute of Technology KanpurVerified email at iitk.ac.in
Alexander S. KulikovSteklov Institute of Mathematics at St. PetersburgVerified email at logic.pdmi.ras.ru
Sangtae KimBertis Bioscience IncVerified email at bertis.com
Richard D SmithChief Scientist and Battelle Fellow, Biological Sciences Division, PNNLVerified email at pnnl.gov
Sridhar HannenhalliSenior Investigator, Cancer Data Science Lab, National Cancer Institute. NIHVerified email at nih.gov
Sing-Hoi SzeDepartment of Computer Science and Engineering, Texas A&M UniversityVerified email at cs.tamu.edu

Pavel Pevzner

Professor of Computer Science, University of California at San Diego

Verified email at eng.ucsd.edu - Homepage

Bioinformatics Algorithms Computational Biology


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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing A Bankevich, S Nurk, D Antipov, AA Gurevich, M Dvorkin, AS Kulikov, ... Journal of computational biology 19 (5), 455-477, 2012	18879	2012
Initial sequencing and comparative analysis of the mouse genome European Bioinformatics Institute: Birney Ewan 3 Goldman Nick 3 Kasprzyk ... Nature 420 (6915), 520-562, 2002	8222	2002
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution Project management: Fulton Lucinda A. 1 Mardis Elaine R. 1 Wilson Richard K. 1 Nature 432 (7018), 695-716, 2004	2808	2004
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking M Wang, JJ Carver, VV Phelan, LM Sanchez, N Garg, Y Peng, ... Nature biotechnology 34 (8), 828-837, 2016	2563	2016
Genome sequence of the Brown Norway rat yields insights into mammalian evolution University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ... Nature 428 (6982), 493-521, 2004	2462	2004
metaSPAdes: a new versatile metagenomic assembler S Nurk, D Meleshko, A Korobeynikov, PA Pevzner Genome research 27 (5), 824-834, 2017	2311	2017
Assembly of long, error-prone reads using repeat graphs M Kolmogorov, J Yuan, Y Lin, PA Pevzner Nature biotechnology 37 (5), 540-546, 2019	1953	2019
An Eulerian path approach to DNA fragment assembly PA Pevzner, H Tang, MS Waterman Proceedings of the national academy of sciences 98 (17), 9748-9753, 2001	1770	2001
De novo identification of repeat families in large genomes AL Price, NC Jones, PA Pevzner Bioinformatics 21 (suppl_1), i351-i358, 2005	1629	2005
Transforming cabbage into turnip: polynomial algorithm for sorting signed permutations by reversals S Hannenhalli, PA Pevzner Journal of the ACM (JACM) 46 (1), 1-27, 1999	1183	1999
Assembling single-cell genomes and mini-metagenomes from chimeric MDA products S Nurk, A Bankevich, D Antipov, AA Gurevich, A Korobeynikov, A Lapidus, ... Journal of Computational Biology 20 (10), 714-737, 2013	1073	2013
Computational molecular biology: an algorithmic approach P Pevzner MIT press, 2000	997	2000
MS-GF+ makes progress towards a universal database search tool for proteomics S Kim, PA Pevzner Nature communications 5 (1), 5277, 2014	983	2014
The complete sequence of a human genome S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ... Science 376 (6588), 44-53, 2022	947	2022
PepNovo: de novo peptide sequencing via probabilistic network modeling A Frank, P Pevzner Analytical chemistry 77 (4), 964-973, 2005	816	2005
How to apply de Bruijn graphs to genome assembly PEC Compeau, PA Pevzner, G Tesler Nature biotechnology 29 (11), 987-991, 2011	813	2011
Combinatorial approaches to finding subtle signals in DNA sequences. PA Pevzner, SH Sze ISMB 8, 269-278, 2000	800	2000
De Novo Peptide Sequencing via Tandem Mass Spectrometry V Dančík, TA Addona, KR Clauser, JE Vath, PA Pevzner Journal of computational biology 6 (3-4), 327-342, 1999	799	1999
An introduction to bioinformatics algorithms NC Jones, PA Pevzner MIT press, 2004	786	2004
Assembling genomes and mini-metagenomes from highly chimeric reads S Nurk, A Bankevich, D Antipov, A Gurevich, A Korobeynikov, A Lapidus, ... Research in Computational Molecular Biology: 17th Annual International …, 2013	734	2013

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