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Manu Tamminen
Manu Tamminen
Academy fellow, University of Turku
Verified email at utu.fi - Homepage
Title
Cited by
Cited by
Year
Tetracycline resistance genes persist at aquaculture farms in the absence of selection pressure
M Tamminen, A Karkman, A Lohmus, WI Muziasari, H Takasu, S Wada, ...
Environmental science & technology 45 (2), 386-391, 2011
3492011
Mobile genes in the human microbiome are structured from global to individual scales
IL Brito, S Yilmaz, K Huang, L Xu, SD Jupiter, AP Jenkins, W Naisilisili, ...
Nature 535 (7612), 435-439, 2016
2692016
Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers
SJ Spencer, MV Tamminen, SP Preheim, MT Guo, AW Briggs, IL Brito, ...
The ISME journal 10 (2), 427-436, 2016
2342016
High-throughput quantification of antibiotic resistance genes from an urban wastewater treatment plant
A Karkman, TA Johnson, C Lyra, RD Stedtfeld, M Tamminen, JM Tiedje, ...
FEMS microbiology ecology 92 (3), fiw014, 2016
2202016
Host range of antibiotic resistance genes in wastewater treatment plant influent and effluent
J Hultman, M Tamminen, K Pärnänen, J Cairns, A Karkman, M Virta
FEMS microbiology ecology 94 (4), fiy038, 2018
1762018
Aquaculture changes the profile of antibiotic resistance and mobile genetic element associated genes in Baltic Sea sediments
WI Muziasari, K Pärnänen, TA Johnson, C Lyra, A Karkman, RD Stedtfeld, ...
FEMS microbiology ecology 92 (4), fiw052, 2016
1732016
Sulphonamide and trimethoprim resistance genes persist in sediments at Baltic Sea aquaculture farms but are not detected in the surrounding environment
WI Muziasari, S Managaki, K Pärnänen, A Karkman, C Lyra, M Tamminen, ...
PLoS One 9 (3), e92702, 2014
1352014
Large-scale analysis of plasmid relationships through gene-sharing networks
M Tamminen, M Virta, R Fani, M Fondi
Molecular Biology and Evolution 29 (4), 1225-1240, 2012
1102012
“Every gene is everywhere but the environment selects”: global geolocalization of gene sharing in environmental samples through network analysis
M Fondi, A Karkman, MV Tamminen, E Bosi, M Virta, R Fani, E Alm, ...
Genome Biology and Evolution 8 (5), 1388-1400, 2016
1012016
Ecology determines how low antibiotic concentration impacts community composition and horizontal transfer of resistance genes
J Cairns, L Ruokolainen, J Hultman, M Tamminen, M Virta, T Hiltunen
Communications biology 1 (1), 35, 2018
922018
Fertilizing with animal manure disseminates antibiotic resistance genes to the farm environment
M Ruuskanen, J Muurinen, A Meierjohan, K Pärnänen, M Tamminen, ...
Journal of environmental quality 45 (2), 488-493, 2016
692016
Cold temperature decreases bacterial species richness in nitrogen‐removing bioreactors treating inorganic mine waters
A Karkman, K Mattila, M Tamminen, M Virta
Biotechnology and bioengineering 108 (12), 2876-2883, 2011
692011
Natural decay process affects the abundance and community structure of Bacteria and Archaea in Picea abies logs
JM Rinta-Kanto, H Sinkko, T Rajala, WA Al-Soud, SJ Sørensen, ...
FEMS microbiology ecology 92 (7), fiw087, 2016
662016
Stream microbial communities and ecosystem functioning show complex responses to multiple stressors in wastewater
FJ Burdon, Y Bai, M Reyes, M Tamminen, P Staudacher, S Mangold, ...
Global change biology 26 (11), 6363-6382, 2020
642020
Occurrence of sul and tet (M) genes in bacterial community in Japanese marine aquaculture environment throughout the year: profile comparison with Taiwanese and Finnish …
S Suzuki, S Nakanishi, M Tamminen, T Yokokawa, Y Sato-Takabe, K Ohta, ...
Science of the Total Environment 669, 649-656, 2019
562019
Evaluating the mobility potential of antibiotic resistance genes in environmental resistomes without metagenomics
K Pärnänen, A Karkman, M Tamminen, C Lyra, J Hultman, L Paulin, ...
Scientific reports 6 (1), 35790, 2016
562016
Differences in bacterial community composition in Baltic Sea sediment in response to fish farming
M Tamminen, A Karkman, J Corander, L Paulin, M Virta
Aquaculture 313 (1-4), 15-23, 2011
562011
Internet‐based CBT intervention for gamblers in Finland: Experiences from the field
S Castrén, M Pankakoski, M Tamminen, J Lipsanen, R Ladouceur, T Lahti
Scandinavian journal of psychology 54 (3), 230-235, 2013
502013
Single gene-based distinction of individual microbial genomes from a mixed population of microbial cells
MV Tamminen, MPJ Virta
Frontiers in Microbiology 6, 134807, 2015
432015
Construction and characterization of synthetic bacterial community for experimental ecology and evolution
J Cairns, R Jokela, M Tamminen, M Virta, T Hiltunen
Frontiers in genetics 9, 390372, 2018
372018
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