Manu Tamminen
Manu Tamminen
Senior lecturer, University of Turku
Verified email at utu.fi - Homepage
TitleCited byYear
Tetracycline resistance genes persist at aquaculture farms in the absence of selection pressure
M Tamminen, A Karkman, A Lohmus, WI Muziasari, H Takasu, S Wada, ...
Environmental science & technology 45 (2), 386-391, 2011
1892011
Mobile genes in the human microbiome are structured from global to individual scales
IL Brito, S Yilmaz, K Huang, L Xu, SD Jupiter, AP Jenkins, W Naisilisili, ...
Nature 535 (7612), 435-439, 2016
962016
Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers
SJ Spencer, MV Tamminen, SP Preheim, MT Guo, AW Briggs, IL Brito, ...
The ISME journal 10 (2), 427-436, 2016
892016
High-throughput quantification of antibiotic resistance genes from an urban wastewater treatment plant
A Karkman, TA Johnson, C Lyra, RD Stedtfeld, M Tamminen, JM Tiedje, ...
FEMS microbiology ecology 92 (3), 2016
862016
Sulphonamide and trimethoprim resistance genes persist in sediments at Baltic Sea aquaculture farms but are not detected in the surrounding environment
WI Muziasari, S Managaki, K Pärnänen, A Karkman, C Lyra, M Tamminen, ...
PLoS One 9 (3), 2014
722014
Large-scale analysis of plasmid relationships through gene-sharing networks
M Tamminen, M Virta, R Fani, M Fondi
Molecular biology and evolution 29 (4), 1225-1240, 2012
662012
Aquaculture changes the profile of antibiotic resistance and mobile genetic element associated genes in Baltic Sea sediments
WI Muziasari, K Pärnänen, TA Johnson, C Lyra, A Karkman, RD Stedtfeld, ...
FEMS microbiology ecology 92 (4), fiw052, 2016
652016
Cold temperature decreases bacterial species richness in nitrogen‐removing bioreactors treating inorganic mine waters
A Karkman, K Mattila, M Tamminen, M Virta
Biotechnology and bioengineering 108 (12), 2876-2883, 2011
432011
“Every gene is everywhere but the environment selects”: global geolocalization of gene sharing in environmental samples through network analysis
M Fondi, A Karkman, MV Tamminen, E Bosi, M Virta, R Fani, E Alm, ...
Genome biology and evolution 8 (5), 1388-1400, 2016
362016
“Every gene is everywhere but the environment selects”: global geolocalization of gene sharing in environmental samples through network analysis
M Fondi, A Karkman, MV Tamminen, E Bosi, M Virta, R Fani, E Alm, ...
Genome biology and evolution 8 (5), 1388-1400, 2016
362016
Differences in bacterial community composition in Baltic Sea sediment in response to fish farming
M Tamminen, A Karkman, J Corander, L Paulin, M Virta
Aquaculture 313 (1-4), 15-23, 2011
342011
Internet‐based CBT intervention for gamblers in Finland: Experiences from the field
S Castrén, M Pankakoski, M Tamminen, J Lipsanen, R Ladouceur, T Lahti
Scandinavian journal of psychology 54 (3), 230-235, 2013
302013
Natural decay process affects the abundance and community structure of Bacteria and Archaea in Picea abies logs
JM Rinta-Kanto, H Sinkko, T Rajala, WA Al-Soud, SJ Sørensen, ...
FEMS microbiology ecology 92 (7), fiw087, 2016
272016
Host range of antibiotic resistance genes in wastewater treatment plant influent and effluent
J Hultman, M Tamminen, K Pärnänen, J Cairns, A Karkman, M Virta
FEMS microbiology ecology 94 (4), fiy038, 2018
262018
Fertilizing with animal manure disseminates antibiotic resistance genes to the farm environment
M Ruuskanen, J Muurinen, A Meierjohan, K Pärnänen, M Tamminen, ...
Journal of environmental quality 45 (2), 488-493, 2016
202016
Evaluating the mobility potential of antibiotic resistance genes in environmental resistomes without metagenomics
K Pärnänen, A Karkman, M Tamminen, C Lyra, J Hultman, L Paulin, ...
Scientific reports 6, 35790, 2016
192016
Single-cell mass spectrometry reveals the importance of genetic diversity and plasticity for phenotypic variation in nitrogen-limited Chlamydomonas
J Krismer, M Tamminen, S Fontana, R Zenobi, A Narwani
The ISME journal 11 (4), 988-998, 2017
142017
Tumor-infiltrating immune repertoires captured by single-cell barcoding in emulsion
AW Briggs, SJ Goldfless, S Timberlake, BJ Belmont, CR Clouser, ...
bioRxiv, 134841, 2017
142017
Single gene-based distinction of individual microbial genomes from a mixed population of microbial cells
MV Tamminen, MPJ Virta
Frontiers in microbiology 6, 195, 2015
142015
Ecology determines how low antibiotic concentration impacts community composition and horizontal transfer of resistance genes
J Cairns, L Ruokolainen, J Hultman, M Tamminen, M Virta, T Hiltunen
Communications biology 1 (1), 1-8, 2018
112018
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