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Manimozhiyan Arumugam
Manimozhiyan Arumugam
Associate Professor, Faculty of Health and Medical Sciences, University of Copenhagen
Adresse e-mail validée de sund.ku.dk - Page d'accueil
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Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
129642019
A human gut microbial gene catalogue established by metagenomic sequencing
J Qin, R Li, J Raes, M Arumugam, KS Burgdorf, C Manichanh, T Nielsen, ...
nature 464 (7285), 59-65, 2010
128392010
Enterotypes of the human gut microbiome
M Arumugam, J Raes, E Pelletier, D Le Paslier, T Yamada, DR Mende, ...
Nature 473 (7346), 174-180, 2011
80912011
Richness of human gut microbiome correlates with metabolic markers
E Le Chatelier, T Nielsen, J Qin, E Prifti, F Hildebrand, G Falony, ...
Nature 500 (7464), 541-546, 2013
46682013
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ...
Nature 428 (6982), 493-521, 2004
25102004
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
K Forslund, F Hildebrand, T Nielsen, G Falony, E Le Chatelier, ...
Nature 528 (7581), 262-266, 2015
19842015
An integrated catalog of reference genes in the human gut microbiome
J Li, H Jia, X Cai, H Zhong, Q Feng, S Sunagawa, M Arumugam, ...
Nature biotechnology 32 (8), 834-841, 2014
19732014
Human gut microbes impact host serum metabolome and insulin sensitivity
HK Pedersen, V Gudmundsdottir, HB Nielsen, T Hyotylainen, T Nielsen, ...
Nature 535 (7612), 376-381, 2016
17522016
Gut microbiome development along the colorectal adenoma–carcinoma sequence
Q Feng, S Liang, H Jia, A Stadlmayr, L Tang, Z Lan, D Zhang, H Xia, X Xu, ...
Nature communications 6 (1), 6528, 2015
11422015
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ...
Nature biotechnology 32 (8), 822-828, 2014
10632014
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
9632018
Metagenomic analysis of faecal microbiome as a tool towards targeted non-invasive biomarkers for colorectal cancer
J Yu, Q Feng, SH Wong, D Zhang, Q yi Liang, Y Qin, L Tang, H Zhao, ...
Gut 66 (1), 70-78, 2017
9272017
Genomic variation landscape of the human gut microbiome
S Schloissnig, M Arumugam, S Sunagawa, M Mitreva, J Tap, A Zhu, ...
Nature 493 (7430), 45-50, 2013
9242013
Enterotypes in the landscape of gut microbial community composition
PI Costea, F Hildebrand, M Arumugam, F Bäckhed, MJ Blaser, ...
Nature microbiology 3 (1), 8-16, 2018
8542018
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ...
Nature medicine 25 (4), 679-689, 2019
8362019
The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates
EG Zoetendal, J Raes, B Van Den Bogert, M Arumugam, CCGM Booijink, ...
The ISME journal 6 (7), 1415-1426, 2012
7192012
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ...
Nature biotechnology 29 (5), 415-420, 2011
7072011
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation
AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ...
Nature medicine 25 (4), 667-678, 2019
6552019
Recovery of gut microbiota of healthy adults following antibiotic exposure
A Palleja, KH Mikkelsen, SK Forslund, A Kashani, KH Allin, T Nielsen, ...
Nature microbiology 3 (11), 1255-1265, 2018
5722018
Transcriptome complexity in a genome-reduced bacterium
M Güell, V Van Noort, E Yus, WH Chen, J Leigh-Bell, K Michalodimitrakis, ...
Science 326 (5957), 1268-1271, 2009
5192009
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