| OSPREY 3.0: Open‐source protein redesign for you, with powerful new features MA Hallen, JW Martin, A Ojewole, JD Jou, AU Lowegard, MS Frenkel, ... Journal of computational chemistry 39 (30), 2494-2507, 2018 | 67 | 2018 |
| Novel, provable algorithms for efficient ensemble-based computational protein design and their application to the redesign of the c-Raf-RBD: KRas protein-protein interface AU Lowegard, MS Frenkel, GT Holt, JD Jou, AA Ojewole, BR Donald PLoS Computational Biology 16 (6), e1007447, 2020 | 13 | 2020 |
| Toward broad spectrum dihydrofolate reductase inhibitors targeting trimethoprim resistant enzymes identified in clinical isolates of methicillin resistant Staphylococcus aureus SM Reeve, D Si, J Krucinska, Y Yan, K Viswanathan, S Wang, GT Holt, ... ACS Infectious Diseases 5 (11), 1896-1906, 2019 | 13 | 2019 |
| Chiral evasion and stereospecific antifolate resistance in Staphylococcus aureus S Wang, SM Reeve, GT Holt, AA Ojewole, MS Frenkel, P Gainza, ... PLoS computational biology 18 (2), e1009855, 2022 | 7 | 2022 |
| Improved HIV-1 neutralization breadth and potency of V2-apex antibodies by in silico design GT Holt, J Gorman, S Wang, AU Lowegard, B Zhang, T Liu, BC Lin, ... Cell reports 42 (7), 2023 | 2 | 2023 |
| Toward Broad Spectrum DHFR inhibitors Targeting Trimethoprim Resistant Enzymes Identified in Clinical Isolates of Methicillin-Resistant Staphylococcus aureus SM Reeve, D Si, J Krucinska, Y Yan, K Viswanathan, S Wang, GT Holt, ... ACS infectious diseases 5 (11), 1896, 2019 | 2 | 2019 |
| Compositions for inhibiting kras signaling and methods of making and using same B Donald, A Lowegard, M Frenkel US Patent App. 17/332,338, 2021 | | 2021 |
| Combined Computational, Experimental, and Assay-Development Studies of M Frenkel Duke University, 2019 | | 2019 |
| Combined Computational, Experimental, and Assay-Development Studies of Protein: Protein and Protein: Small Molecule Complexes, with Applications to the Inhibition of Enzymes … M Frenkel | | 2019 |
| Predicting the Effect of Mutations in the KRas/c-Raf-RBD Protein-Protein Interface A Lowegard, M Frenkel, B Donald Biophysical Journal 114 (3), 576a, 2018 | | 2018 |
| How we responded to reviewers’ comments: Novel, Provable Algorithms for Efficient Ensemble-Based Computational Protein Design and Their Application to the Redesign of the c-Raf … AU Lowegard, MS Frenkel, GT Holt, JD Jou, AA Ojewole, BR Donald | | |
