Loyal A. Goff
Loyal A. Goff
Johns Hopkins Institute of Genetic Medicine
Verified email at jhmi.edu - Homepage
TitleCited byYear
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
C Trapnell, A Roberts, L Goff, G Pertea, D Kim, DR Kelley, H Pimentel, ...
Nature protocols 7 (3), 562, 2012
73952012
Differential analysis of gene regulation at transcript resolution with RNA-seq
C Trapnell, DG Hendrickson, M Sauvageau, L Goff, JL Rinn, L Pachter
Nature biotechnology 31 (1), 46, 2013
23432013
Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
MN Cabili, C Trapnell, L Goff, M Koziol, B Tazon-Vega, A Regev, JL Rinn
Genes & development 25 (18), 1915-1927, 2011
23322011
Multiple knockout mouse models reveal lincRNAs are required for life and brain development
M Sauvageau, LA Goff, S Lodato, B Bonev, AF Groff, C Gerhardinger, ...
elife 2, e01749, 2013
4682013
Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre
E Hacisuleyman, LA Goff, C Trapnell, A Williams, J Henao-Mejia, L Sun, ...
Nature structural & molecular biology 21 (2), 198, 2014
3762014
DNMT1-interacting RNAs block gene-specific DNA methylation
A Di Ruscio, AK Ebralidze, T Benoukraf, G Amabile, LA Goff, J Terragni, ...
Nature 503 (7476), 371, 2013
3722013
Long noncoding RNAs regulate adipogenesis
L Sun, LA Goff, C Trapnell, R Alexander, KA Lo, E Hacisuleyman, ...
Proceedings of the National Academy of Sciences 110 (9), 3387-3392, 2013
3302013
Differential regulation of microRNA stability
S Bail, M Swerdel, H Liu, X Jiao, LA Goff, RP Hart, M Kiledjian
Rna 16 (5), 1032-1039, 2010
2582010
MicroRNA expression pattern of undifferentiated and differentiated human embryonic stem cells
U Lakshmipathy, B Love, LA Goff, R Jörnsten, R Graichen, RP Hart, ...
Stem cells and development 16 (6), 1003-1016, 2007
2022007
The microRNA miR-181 is a critical cellular metabolic rheostat essential for NKT cell ontogenesis and lymphocyte development and homeostasis
J Henao-Mejia, A Williams, LA Goff, M Staron, P Licona-Limón, SM Kaech, ...
Immunity 38 (5), 984-997, 2013
1852013
cummeRbund: Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data
L Goff, C Trapnell, D Kelley
R package version 2 (0), 2013
1502013
DeCoN: genome-wide analysis of in vivo transcriptional dynamics during pyramidal neuron fate selection in neocortex
BJ Molyneaux, LA Goff, AC Brettler, HH Chen, JR Brown, S Hrvatin, ...
Neuron 85 (2), 275-288, 2015
1262015
Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors
LA Goff, J Davila, MR Swerdel, JC Moore, RI Cohen, H Wu, YE Sun, ...
PloS one 4 (9), e7192, 2009
1172009
Linking RNA biology to lncRNAs
LA Goff, JL Rinn
Genome research 25 (10), 1456-1465, 2015
1072015
Differentiating human multipotent mesenchymal stromal cells regulate microRNAs: prediction of microRNA regulation by PDGF during osteogenesis
LA Goff, S Boucher, CL Ricupero, S Fenstermacher, M Swerdel, ...
Experimental hematology 36 (10), 1354-1369. e2, 2008
1032008
The long non-coding RNA Morrbid regulates Bim and short-lived myeloid cell lifespan
JJ Kotzin, SP Spencer, SJ McCright, DBU Kumar, MA Collet, WK Mowel, ...
Nature 537 (7619), 239, 2016
972016
Spatiotemporal expression and transcriptional perturbations by long noncoding RNAs in the mouse brain
LA Goff, AF Groff, M Sauvageau, Z Trayes-Gibson, DB Sanchez-Gomez, ...
Proceedings of the National Academy of Sciences 112 (22), 6855-6862, 2015
762015
Expression profiling of synaptic microRNAs from the adult rat brain identifies regional differences and seizure-induced dynamic modulation
I Pichardo-Casas, LA Goff, MR Swerdel, A Athie, J Davila, ...
Brain research 1436, 20-33, 2012
762012
Rational probe optimization and enhanced detection strategy for microRNAs using microarrays
LA Goff, M Yang, J Bowers, RC Getts, RW Padgett, RP Hart
RNA biology 2 (3), 93-100, 2005
702005
Evaluation of sense-strand mRNA amplification by comparative quantitative PCR
LA Goff, J Bowers, J Schwalm, K Howerton, RC Getts, RP Hart
Bmc Genomics 5 (1), 76, 2004
642004
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Articles 1–20