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Daniel P Rice
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Pervasive genetic hitchhiking and clonal interference in forty evolving yeast populations
GI Lang, DP Rice, MJ Hickman, E Sodergren, GM Weinstock, D Botstein, ...
Nature 500 (7464), 571-574, 2013
6092013
Global Epistasis Makes Adaptation Predictable Despite Sequence-Level Stochasticity
S Kryazhimskiy, DP Rice, E Jerison, MM Desai
Science 344 (6191), 1519-1522, 2014
4402014
Sex speeds adaptation by altering the dynamics of molecular evolution
MJ McDonald, DP Rice, MM Desai
Nature 531 (7593), 233-236, 2016
3492016
Adaptive evolution of genomically recoded Escherichia coli
TM Wannier, AM Kunjapur, DP Rice, MJ McDonald, MM Desai, ...
Proceedings of the National Academy of Sciences 115 (12), 3090-3095, 2018
932018
Gene expression evolves under a house-of-cards model of stabilizing selection
A Hodgins-Davis, DP Rice, JP Townsend
Molecular Biology and Evolution 32 (8), 2130-2140, 2015
752015
Population Subdivision and Adaptation in Asexual Populations of Saccharomyces cerevisiae
S Kryazhimskiy, DP Rice, MM Desai
Evolution, 2012
652012
A genomic and evolutionary approach reveals non-genetic drug resistance in malaria
JD Herman, DP Rice, U Ribacke, J Silterra, AA Deik, EL Moss, ...
Genome biology 15, 511, 2014
432014
The evolutionarily stable distribution of fitness effects
DP Rice, BH Good, MM Desai
Genetics 200 (1), 321-329, 2015
412015
A variant-centric perspective on geographic patterns of human allele frequency variation
A Biddanda, DP Rice, J Novembre
Elife 9, e60107, 2020
382020
A test for selection employing quantitative trait locus and mutation accumulation data
DP Rice, JP Townsend
Genetics 190 (4), 1533-1545, 2012
212012
Resampling QTL effects in the QTL sign test leads to incongruous sensitivity to variance in effect size
DP Rice, JP Townsend
G3: Genes| Genomes| Genetics 2 (8), 905-911, 2012
112012
Distinguishing multiple-merger from Kingman coalescence using two-site frequency spectra
DP Rice, J Novembre, MM Desai
bioRxiv, 461517, 2018
92018
Polygenic score accuracy in ancient samples: quantifying the effects of allelic turnover
MO Carlson, DP Rice, JJ Berg, M Steinrücken
PLoS Genetics 18 (5), e1010170, 2022
62022
Geographic patterns of human allele frequency variation: a variant-centric perspective
A Biddanda, DP Rice, J Novembre
BioRxiv, 2020.07. 01.182311, 2020
22020
Concentration and nucleic acid extraction of viruses from wastewater primary sludge
AN Machtinger, OS Hershey, WJ Bradshaw, EH Soice, DP Rice, ...
2024
Concentration and nucleic acid extraction of viruses from aggregated airplane waste
AN Machtinger, OS Hershey, WJ Bradshaw, DP Rice, MR McLaren
2024
Concentration and nucleic acid extraction of viruses from wastewater influent
AN Machtinger, OS Hershey, WJ Bradshaw, DP Rice, MR McLaren
2024
Inferring the sensitivity of wastewater metagenomic sequencing for pathogen early detection
SL Grimm, JT Kaufman, DP Rice, C Whittaker, WJ Bradshaw, ...
medRxiv, 2023.12. 22.23300450, 2023
2023
Virus-like DNA tracers for characterizing wastewater-based pathogen monitoring systems
A Gopal, AN Machtinger, B Wang, DP Rice, MR McLaren, KM Esvelt
bioRxiv, 2023.12. 24.573197, 2023
2023
S1 Text. Extended model, methods, and results for
MO Carlson, DP Rice, JJ Berg, M Steinrücken
2022
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