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Sitao Wu
Sitao Wu
Ambry Genetics, A Konica Minolta Company
Verified email at ambrygen.com
Title
Cited by
Cited by
Year
CD-HIT: accelerated for clustering the next-generation sequencing data
L Fu, B Niu, Z Zhu, S Wu, W Li
Bioinformatics 28 (23), 3150-3152, 2012
73372012
LOMETS: a local meta-threading-server for protein structure prediction
S Wu, Y Zhang
Nucleic acids research 35 (10), 3375-3382, 2007
9712007
Ab initio modeling of small proteins by iterative TASSER simulations
S Wu, J Skolnick, Y Zhang
BMC biology 5, 1-10, 2007
6662007
WebMGA: a customizable web server for fast metagenomic sequence analysis
S Wu, Z Zhu, L Fu, B Niu, W Li
BMC genomics 12, 1-9, 2011
6462011
Ultrafast clustering algorithms for metagenomic sequence analysis
W Li, L Fu, B Niu, S Wu, J Wooley
Briefings in bioinformatics 13 (6), 656-668, 2012
4752012
MUSTER: improving protein sequence profile–profile alignments by using multiple sources of structure information
S Wu, Y Zhang
Proteins: Structure, Function, and Bioinformatics 72 (2), 547-556, 2008
4382008
De novo variants in neurodevelopmental disorders with epilepsy
HO Heyne, T Singh, H Stamberger, R Abou Jamra, H Caglayan, D Craiu, ...
Nature genetics 50 (7), 1048-1053, 2018
2592018
A comprehensive assessment of sequence-based and template-based methods for protein contact prediction
S Wu, Y Zhang
Bioinformatics 24 (7), 924-931, 2008
2302008
Induction machine fault detection using SOM-based RBF neural networks
S Wu, TWS Chow
IEEE Transactions on Industrial Electronics 51 (1), 183-194, 2004
2212004
Clustering of the self-organizing map using a clustering validity index based on inter-cluster and intra-cluster density
S Wu, TWS Chow
Pattern Recognition 37 (2), 175-188, 2004
2032004
Association of breast and ovarian cancers with predisposition genes identified by large-scale sequencing
HM Lu, S Li, MH Black, S Lee, R Hoiness, S Wu, W Mu, R Huether, ...
JAMA oncology 5 (1), 51-57, 2019
1772019
Worm burden-dependent disruption of the porcine colon microbiota by Trichuris suis infection
S Wu, RW Li, W Li, E Beshah, HD Dawson, JF Urban Jr
PloS one 7 (4), e35470, 2012
1472012
Perturbation dynamics of the rumen microbiota in response to exogenous butyrate
RW Li, S Wu, RL Baldwin, W Li, C Li
PloS one 7 (1), e29392, 2012
1272012
PRSOM: A new visualization method by hybridizing multidimensional scaling and self-organizing map
S Wu, TWS Chow
IEEE Transactions on Neural Networks 16 (6), 1362-1380, 2005
1082005
The bacterial community composition of the bovine rumen detected using pyrosequencing of 16S rRNA genes
RL Baldwin, W Li, C Li, EE Connor, RW Li
Metagenomics, b1-11, 2012
1062012
ANGLOR: a composite machine-learning algorithm for protein backbone torsion angle prediction
S Wu, Y Zhang
PloS one 3 (10), e3400, 2008
992008
Metagenome plasticity of the bovine abomasal microbiota in immune animals in response to Ostertagia ostertagi infection
RW Li, S Wu, W Li, Y Huang, LC Gasbarre
PloS one 6 (9), e24417, 2011
792011
Improving protein structure prediction using multiple sequence-based contact predictions
S Wu, A Szilagyi, Y Zhang
Structure 19 (8), 1182-1191, 2011
792011
FR-HIT, a very fast program to recruit metagenomic reads to homologous reference genomes
B Niu, Z Zhu, L Fu, S Wu, W Li
Bioinformatics 27 (12), 1704-1705, 2011
792011
Quantification of transcriptome responses of the rumen epithelium to butyrate infusion using RNA-seq technology
RL Baldwin, S Wu, W Li, C Li, BJ Bequette, RW Li
Gene Regulation and Systems Biology 6, GRSB. S9687, 2012
762012
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