Rex R Malmstrom
Rex R Malmstrom
Staff Scientist / Director Microscale Applications Research Group; DOE Joint Genome Institute
Verified email at lbl.gov - Homepage
TitleCited byYear
Single-cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus
N Kashtan, SE Roggensack, S Rodrigue, JW Thompson, SJ Biller, A Coe, ...
Science 344 (6182), 416-420, 2014
2952014
Whole genome amplification and de novo assembly of single bacterial cells
S Rodrigue, RR Malmstrom, AM Berlin, BW Birren, MR Henn, ...
PloS one 4 (9), e6864, 2009
2832009
Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea
J McCarren, JW Becker, DJ Repeta, Y Shi, CR Young, RR Malmstrom, ...
Proceedings of the National Academy of Sciences 107 (38), 16420-16427, 2010
2742010
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ...
Nature biotechnology 35 (8), 725, 2017
2082017
Contribution of SAR11 bacteria to dissolved dimethylsulfoniopropionate and amino acid uptake in the North Atlantic Ocean
RR Malmstrom, RP Kiene, MT Cottrell, DL Kirchman
Appl. Environ. Microbiol. 70 (7), 4129-4135, 2004
2082004
Biogeography of major bacterial groups in the Delaware Estuary
DL Kirchman, AI Dittel, RR Malmstrom, MT Cottrell
Limnology and oceanography 50 (5), 1697-1706, 2005
1892005
Standing stocks and activity of Archaea and Bacteria in the western Arctic Ocean
DL Kirchman, H Elifantz, AI Dittel, RR Malmstrom, MT Cottrell
Limnology and Oceanography 52 (2), 495-507, 2007
1802007
Unlocking short read sequencing for metagenomics
S Rodrigue, AC Materna, SC Timberlake, MC Blackburn, RR Malmstrom, ...
PloS one 5 (7), e11840, 2010
1672010
Biomass production and assimilation of dissolved organic matter by SAR11 bacteria in the Northwest Atlantic Ocean
RR Malmstrom, MT Cottrell, H Elifantz, DL Kirchman
Appl. Environ. Microbiol. 71 (6), 2979-2986, 2005
1512005
Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans
RR Malmstrom, A Coe, GC Kettler, AC Martiny, J Frias-Lopez, ER Zinser, ...
The ISME journal 4 (10), 1252, 2010
1442010
Identification and enumeration of bacteria assimilating dimethylsulfoniopropionate (DMSP) in the North Atlantic and Gulf of Mexico
RR Malmstrom, RP Kiene, DL Kirchman
Limnology and Oceanography 49 (2), 597-606, 2004
1392004
Obtaining genomes from uncultivated environmental microorganisms using FACS–based single-cell genomics
C Rinke, J Lee, N Nath, D Goudeau, B Thompson, N Poulton, E Dmitrieff, ...
Nature protocols 9 (5), 1038, 2014
1372014
Decontamination of MDA reagents for single cell whole genome amplification
T Woyke, A Sczyrba, J Lee, C Rinke, D Tighe, S Clingenpeel, ...
PloS one 6 (10), e26161, 2011
1262011
Control of bacterial growth by temperature and organic matter in the Western Arctic
DL Kirchman, RR Malmstrom, MT Cottrell
Deep Sea Research Part II: Topical Studies in Oceanography 52 (24-26), 3386-3395, 2005
1162005
Assimilation of polysaccharides and glucose by major bacterial groups in the Delaware Estuary
H Elifantz, RR Malmstrom, MT Cottrell, DL Kirchman
Appl. Environ. Microbiol. 71 (12), 7799-7805, 2005
1092005
The epigenomic landscape of prokaryotes
MJ Blow, TA Clark, CG Daum, AM Deutschbauer, A Fomenkov, R Fries, ...
PLoS genetics 12 (2), e1005854, 2016
1062016
Diversity, abundance, and biomass production of bacterial groups in the western Arctic Ocean
RR Malmstrom, TRA Straza, MT Cottrell, DL Kirchman
Aquatic microbial ecology 47 (1), 45-55, 2007
1062007
Standing stocks, production, and respiration of phytoplankton and heterotrophic bacteria in the western Arctic Ocean
DL Kirchman, V Hill, MT Cottrell, R Gradinger, RR Malmstrom, A Parker
Deep Sea Research Part II: Topical Studies in Oceanography 56 (17), 1237-1248, 2009
1042009
Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations
ML Bendall, SLR Stevens, LK Chan, S Malfatti, P Schwientek, J Tremblay, ...
The ISME journal 10 (7), 1589, 2016
972016
Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage
TW Ghylin, SL Garcia, F Moya, BO Oyserman, P Schwientek, KT Forest, ...
The ISME journal 8 (12), 2503, 2014
872014
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