Paul Stothard
Paul Stothard
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DrugBank: a comprehensive resource for in silico drug discovery and exploration
DS Wishart, C Knox, AC Guo, S Shrivastava, M Hassanali, P Stothard, ...
Nucleic acids research 34 (suppl_1), D668-D672, 2006
HMDB: the human metabolome database
DS Wishart, D Tzur, C Knox, R Eisner, AC Guo, N Young, D Cheng, ...
Nucleic acids research 35 (suppl_1), D521-D526, 2007
The sequence manipulation suite: JavaScript programs for analyzing and formatting protein and DNA sequences
P Stothard
Biotechniques 28 (6), 1102-1104, 2000
The genome sequence of taurine cattle: a window to ruminant biology and evolution
CG Elsik, RL Tellam, KC Worley
Science 324 (5926), 522-528, 2009
Circular genome visualization and exploration using CGView
P Stothard, DS Wishart
Bioinformatics 21 (4), 537-539, 2005
Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle
HD Daetwyler, A Capitan, H Pausch, P Stothard, R Van Binsbergen, ...
Nature genetics 46 (8), 858, 2014
The CGView Server: a comparative genomics tool for circular genomes
JR Grant, P Stothard
Nucleic acids research 36 (suppl_2), W181-W184, 2008
BASys: a web server for automated bacterial genome annotation
GH Van Domselaar, P Stothard, S Shrivastava, JA Cruz, AC Guo, X Dong, ...
Nucleic acids research 33 (suppl_2), W455-W459, 2005
Genomic analyses identify distinct patterns of selection in domesticated pigs and Tibetan wild boars
M Li, S Tian, L Jin, G Zhou, Y Li, Y Zhang, T Wang, CKL Yeung, L Chen, ...
Nature genetics 45 (12), 1431, 2013
PolySearch: a web-based text mining system for extracting relationships between human diseases, genes, mutations, drugs and metabolites
D Cheng, C Knox, N Young, P Stothard, S Damaraju, DS Wishart
Nucleic acids research 36 (suppl_2), W399-W405, 2008
The genome sequence of taurine cattle: a window to ruminant biology and evolution
TBG Sequencing, CG Elsik, RL Tellam, KC Worley, Analysis Consortium
Science (New York, NY) 324 (5926), 522, 2009
The CyberCell Database (CCDB): a comprehensive, self‐updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli
S Sundararaj, A Guo, B Habibi‐Nazhad, M Rouani, P Stothard, M Ellison, ...
Nucleic acids research 32 (suppl_1), D293-D295, 2004
Whole genome linkage disequilibrium maps in cattle
SD McKay, RD Schnabel, BM Murdoch, LK Matukumalli, J Aerts, ...
BMC genetics 8 (1), 74, 2007
Comparing thousands of circular genomes using the CGView Comparison Tool
JR Grant, AS Arantes, P Stothard
BMC genomics 13 (1), 202, 2012
Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery
P Stothard, JW Choi, U Basu, JM Sumner-Thomson, Y Meng, X Liao, ...
BMC genomics 12 (1), 559, 2011
Interactive microbial genome visualization with GView
A Petkau, M Stuart-Edwards, P Stothard, G Van Domselaar
Bioinformatics 26 (24), 3125-3126, 2010
PlasMapper: a web server for drawing and auto-annotating plasmid maps
X Dong, P Stothard, IJ Forsythe, DS Wishart
Nucleic acids research 32 (suppl_2), W660-W664, 2004
In-depth annotation of SNPs arising from resequencing projects using NGS-SNP
JR Grant, AS Arantes, X Liao, P Stothard
Bioinformatics 27 (16), 2300-2301, 2011
The genome of Polaromonas sp. strain JS666: insights into the evolution of a hydrocarbon-and xenobiotic-degrading bacterium, and features of relevance to biotechnology
TE Mattes, AK Alexander, PM Richardson, AC Munk, CS Han, P Stothard, ...
Appl. Environ. Microbiol. 74 (20), 6405-6416, 2008
Genome Sequence and Assembly of Bos indicus
FC Canavez, DD Luche, P Stothard, KRM Leite, JM Sousa-Canavez, ...
Journal of Heredity 103 (3), 342-348, 2012
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