Murray Patterson

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Jan ManuchComputer Science, University of British ColumbiaVerified email at cs.ubc.ca
Nadia PisantiUniversity of Pisa & Erable Team INRIAVerified email at di.unipi.it
Tobias MarschallHeinrich Heine University DüsseldorfVerified email at hhu.de
Cedric ChauveProfessor of Mathematics, Simon Fraser UniversityVerified email at sfu.ca
Alexander SchönhuthSenior Researcher, Centrum Wiskunde & Informatica, AmsterdamVerified email at cwi.nl
Gunnar W. KlauHeinrich Heine University DüsseldorfVerified email at hhu.de
Gianluca Della VedovaUniversità degli Studi di Milano-BicoccaVerified email at dellavedova.org
Leen StougieSenior Researcher CWI, Prof. of Operations Research Vrije Universiteit, AmsterdamVerified email at cwi.nl
Leo van IerselAssociate professor, TU DelftVerified email at tudelft.nl
Paola BonizzoniUniversity of Milano BicoccaVerified email at unimib.it
Eric TannierINRIA, Université de Lyon 1Verified email at inria.fr
Shilpa GargUniversity of CopenhagenVerified email at bio.ku.dk
mauricio abel soto gomezPostdoc, Università di MIlano-BicoccaVerified email at unimib.it
Simone CiccolellaUniversity of Study Milano-BicoccaVerified email at campus.unimib.it
Vincent DaubincnrsVerified email at univ-lyon1.fr
Massimo TorquatiComputer Science Department University of Pisa, ItalyVerified email at di.unipi.it
Andrea BraccialiSICSA Lecturer, Stirling UniversityVerified email at cs.stir.ac.uk
Marco AldinucciFull Professor in Computer Science, University of TorinoVerified email at unito.it
Yongmei Liu (刘咏梅)Professor, Vice Dean of Business School, Central South University (中南大学)Verified email at csu.edu.cn
Marcel MartinScience for Life Laboratory, StockholmVerified email at scilifelab.se

Murray Patterson

Assistant Professor, Georgia State University

Verified email at cs.gsu.edu - Homepage

Computational Biology Algorithms Combinatorics


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WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads M Patterson, T Marschall, N Pisanti, L Van Iersel, L Stougie, GW Klau, ... Journal of Computational Biology 22 (6), 498-509, 2015	138	2015
WhatsHap: fast and accurate read-based phasing M Martin, M Patterson, S Garg, S Fischer, N Pisanti, GW Klau, ... BioRxiv, 085050, 2016	50	2016
WhatsHap: Haplotype Assembly for Future-Generation Sequencing Reads M Patterson, T Marschall, N Pisanti, L van Iersel, L Stougie, GW Klau, ... International Conference on Research in Computational Molecular Biology, 237-249, 2014	37	2014
DeCoSTAR: Reconstructing the ancestral organization of genes or genomes using reconciled phylogenies W Duchemin, Y Anselmetti, M Patterson, Y Ponty, S Bérard, C Chauve, ... Genome biology and evolution 9 (5), 1312-1319, 2017	32	2017
Linearization of ancestral multichromosomal genomes J Maňuch, M Patterson, R Wittler, C Chauve, E Tannier BMC bioinformatics 13 (19), 1-11, 2012	32	2012
Lateral gene transfer, rearrangement, reconciliation M Patterson, G Szöllősi, V Daubin, E Tannier BMC bioinformatics 14 (15), 1-7, 2013	28	2013
Grounding for model expansion in k-guarded formulas with inductive definitions MD Patterson, Y Liu, E Ternovska, A Gupta Simon Fraser University, 2006	26	2006
On the gapped consecutive-ones property C Chauve, J Maňuch, M Patterson Electronic Notes in Discrete Mathematics 34, 121-125, 2009	17	2009
Consistency of sequence-based gene clusters R Wittler, J Maňuch, M Patterson, J Stoye Journal of Computational Biology 18 (9), 1023-1039, 2011	15	2011
Economic drivers of change and their oceanic-coastal ecological impacts M Patterson, D Hardy Ecological economics of the oceans and coasts. Edward Elgar Publishing, 187-209, 2008	14	2008
Hypergraph covering problems motivated by genome assembly questions C Chauve, M Patterson, A Rajaraman International Workshop on Combinatorial Algorithms, 428-432, 2013	11	2013
Complexity of finding non-planar rectilinear drawings of graphs J Maňuch, M Patterson, SH Poon, C Thachuk International Symposium on Graph Drawing, 305-316, 2010	11	2010
Inferring Cancer Progression from Single Cell Sequencing while allowing loss of mutations S Ciccolella, MS Gomez, M Patterson, G Della Vedova, I Hajirasouliha, ... bioRxiv, 268243, 2018	10	2018
PWHATSHAP: efficient haplotyping for future generation sequencing A Bracciali, M Aldinucci, M Patterson, T Marschall, N Pisanti, I Merelli, ... BMC bioinformatics 17 (11), 27-41, 2016	10	2016
WhatsHap: fast and accurate read-based phasing. bioRxiv, 085050 M Martin, M Patterson, S Garg, SO Fischer, N Pisanti, GW Klau, ...	9	2016
Hardness results on the gapped consecutive-ones property problem J Maňuch, M Patterson, C Chauve Discrete Applied Mathematics 160 (18), 2760-2768, 2012	8	2012
Hardness results on the gapped consecutive-ones property problem J Maňuch, M Patterson, C Chauve Discrete Applied Mathematics 160 (18), 2760-2768, 2012	8	2012
The complexity of the gapped consecutive-ones property problem for matrices of bounded maximum degree J Maňuch, M Patterson Journal of Computational Biology 18 (9), 1243-1253, 2011	8	2011
Tractability results for the Consecutive-Ones Property with multiplicity C Chauve, J Maňuch, M Patterson, R Wittler Annual Symposium on Combinatorial Pattern Matching, 90-103, 2011	8	2011
O Fischer M Martin, M Patterson, S Garg bioRxiv, 2016	7	2016

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