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Aryeh Warmflash
Aryeh Warmflash
Biosciences, Biochemistry and Cell Biology, Rice University
Verified email at rice.edu - Homepage
Title
Cited by
Cited by
Year
A method to recapitulate early embryonic spatial patterning in human embryonic stem cells
A Warmflash, B Sorre, F Etoc, ED Siggia, AH Brivanlou
Nature methods 11 (8), 847-854, 2014
8222014
Multilineage transcriptional priming and determination of alternate hematopoietic cell fates
P Laslo, CJ Spooner, A Warmflash, DW Lancki, HJ Lee, R Sciammas, ...
Cell 126 (4), 755-766, 2006
7512006
Chandra Observations of NGC 4636—an Elliptical Galaxy in Turmoil
C Jones, W Forman, A Vikhlinin, M Markevitch, L David, A Warmflash, ...
The Astrophysical Journal 567 (2), L115, 2002
1892002
Dissecting the dynamics of signaling events in the BMP, WNT, and NODAL cascade during self-organized fate patterning in human gastruloids
S Chhabra, L Liu, R Goh, X Kong, A Warmflash
PLoS biology 17 (10), e3000498, 2019
1582019
Umbrella sampling for nonequilibrium processes
A Warmflash, P Bhimalapuram, AR Dinner
The Journal of chemical physics 127, 154112, 2007
1562007
An incoherent regulatory network architecture that orchestrates B cell diversification in response to antigen signaling
R Sciammas, Y Li, A Warmflash, Y Song, AR Dinner, H Singh
Molecular systems biology 7 (1), 495, 2011
1462011
Self-organization of human embryonic stem cells on micropatterns
A Deglincerti, F Etoc, MC Guerra, I Martyn, J Metzger, A Ruzo, ...
Nature Protocols 11 (11), 2223-2232, 2016
1422016
Encoding of temporal signals by the TGF-β pathway and implications for embryonic patterning
B Sorre, A Warmflash, AH Brivanlou, ED Siggia
Developmental cell 30 (3), 334-342, 2014
1312014
Human neural tube morphogenesis in vitro by geometric constraints
E Karzbrun, AH Khankhel, HC Megale, SMK Glasauer, Y Wyle, G Britton, ...
Nature 599 (7884), 268-272, 2021
1242021
Dynamics of TGF-β signaling reveal adaptive and pulsatile behaviors reflected in the nuclear localization of transcription factor Smad4
A Warmflash, Q Zhang, B Sorre, A Vonica, ED Siggia, AH Brivanlou
Proceedings of the National Academy of Sciences 109 (28), E1947-E1956, 2012
1142012
Stem-cell-based embryo models for fundamental research and translation
J Fu, A Warmflash, MP Lutolf
Nature materials 20 (2), 132-144, 2021
1122021
Endothelial cells decode VEGF-mediated Ca2+ signaling patterns to produce distinct functional responses
DP Noren, WH Chou, SH Lee, AA Qutub, A Warmflash, DS Wagner, ...
Science signaling 9 (416), ra20-ra20, 2016
1072016
Infall of the elliptical galaxy NGC 1404 into the fornax cluster
M Machacek, A Dosaj, W Forman, C Jones, M Markevitch, A Vikhlinin, ...
The Astrophysical Journal 621 (2), 663, 2005
952005
Rapid changes in morphogen concentration control self-organized patterning in human embryonic stem cells
I Heemskerk, K Burt, M Miller, S Chhabra, MC Guerra, L Liu, A Warmflash
Elife 8, e40526, 2019
932019
Nonequilibrium umbrella sampling in spaces of many order parameters
A Dickson, A Warmflash, AR Dinner
The Journal of chemical physics 130, 074104, 2009
902009
Separating forward and backward pathways in nonequilibrium umbrella sampling
A Dickson, A Warmflash, AR Dinner
The Journal of chemical physics 131, 154104, 2009
802009
Morphogen and community effects determine cell fates in response to BMP4 signaling in human embryonic stem cells
A Nemashkalo, A Ruzo, I Heemskerk, A Warmflash
Development 144 (17), 3042-3053, 2017
772017
A novel self-organizing embryonic stem cell system reveals signaling logic underlying the patterning of human ectoderm
G Britton, I Heemskerk, R Hodge, AA Qutub, A Warmflash
Development 146 (20), dev179093, 2019
632019
Synergy with TGFβ ligands switches WNT pathway dynamics from transient to sustained during human pluripotent cell differentiation
J Massey, Y Liu, O Alvarenga, T Saez, M Schmerer, A Warmflash
Proceedings of the National Academy of Sciences 116 (11), 4989-4998, 2019
562019
Signatures of combinatorial regulation in intrinsic biological noise
A Warmflash, AR Dinner
Proceedings of the National Academy of Sciences 105 (45), 17262, 2008
522008
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