Robert S Harris
Robert S Harris
Assistant Research Professor, Pennsylvania State University
Verified email at
TitleCited byYear
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
International Chicken Genome Sequencing Consortium
Nature 432 (7018), 695, 2004
A comparative encyclopedia of DNA elements in the mouse genome
F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ...
Nature 515 (7527), 355, 2014
Genome analysis of the platypus reveals unique signatures of evolution
WC Warren, LDW Hillier, JAM Graves, E Birney, CP Ponting, F Grützner, ...
Nature 453 (7192), 175, 2008
Improved pairwise Alignmnet of genomic DNA
RS Harris
Comparative and demographic analysis of orang-utan genomes
DP Locke, LDW Hillier, WC Warren, KC Worley, LV Nazareth, DM Muzny, ...
Nature 469 (7331), 529, 2011
Complete Khoisan and Bantu genomes from southern Africa
SC Schuster, W Miller, A Ratan, LP Tomsho, B Giardine, LR Kasson, ...
Nature 463 (7283), 943, 2010
Integrative annotation of chromatin elements from ENCODE data
MM Hoffman, J Ernst, SP Wilder, A Kundaje, RS Harris, M Libbrecht, ...
Nucleic acids research 41 (2), 827-841, 2012
28-way vertebrate alignment and conservation track in the UCSC Genome Browser
W Miller, K Rosenbloom, RC Hardison, M Hou, J Taylor, B Raney, ...
Genome research 17 (12), 1797-1808, 2007
Alignathon: a competitive assessment of whole-genome alignment methods
D Earl, N Nguyen, G Hickey, RS Harris, S Fitzgerald, K Beal, I Seledtsov, ...
Genome research 24 (12), 2077-2089, 2014
Accurate typing of short tandem repeats from genome-wide sequencing data and its applications
A Fungtammasan, G Ananda, SE Hile, MSW Su, C Sun, R Harris, ...
Genome research 25 (5), 736-749, 2015
A time-and cost-effective strategy to sequence mammalian Y Chromosomes: an application to the de novo assembly of gorilla Y
M Tomaszkiewicz, S Rangavittal, M Cechova, RC Sanchez, ...
Genome research 26 (4), 530-540, 2016
HECTOR: a parallel multistage homopolymer spectrum based error corrector for 454 sequencing data
A Wirawan, RS Harris, Y Liu, B Schmidt, J Schröder
BMC bioinformatics 15 (1), 131, 2014
Primary sequence and epigenetic determinants of in vivo occupancy of genomic DNA by GATA1
Y Zhang, W Wu, Y Cheng, DC King, RS Harris, J Taylor, F Chiaromonte, ...
Nucleic acids research 37 (21), 7024-7038, 2009
Allsome sequence bloom trees
C Sun, RS Harris, R Chikhi, P Medvedev
Journal of Computational Biology 25 (5), 467-479, 2018
Long-read sequencing technology indicates genome-wide effects of non-B DNA on polymerization speed and error rate
WM Guiblet, MA Cremona, M Cechova, RS Harris, I Kejnovska, ...
Genome research 28 (12), 1767-1778, 2018
HomologMiner: looking for homologous genomic groups in whole genomes
M Hou, P Berman, CH Hsu, RS Harris
Bioinformatics 23 (8), 917-925, 2007
RecoverY: k-mer-based read classification for Y-chromosome-specific sequencing and assembly
S Rangavittal, RS Harris, M Cechova, M Tomaszkiewicz, R Chikhi, ...
Bioinformatics 34 (7), 1125-1131, 2017
Noise-Cancelling Repeat Finder: Uncovering tandem repeats in error-prone long-read sequencing data
KD Harris, R.S., Cechova, M., Makova
Bioinformatics, 2019
Noise-Cancelling Repeat Finder: Uncovering tandem repeats in error-prone long-read sequencing data
RS Harris, M Cechova, K Makova
bioRxiv, 475194, 2018
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