Mihai Pop
Mihai Pop
Professor of Computer Science, University of Maryland, College Park
Verified email at umd.edu - Homepage
Cited by
Cited by
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
B Langmead, C Trapnell, M Pop, SL Salzberg
Genome biology 10 (3), R25, 2009
Structure, function and diversity of the healthy human microbiome
C Huttenhower, D Gevers, R Knight, S Abubucker, JH Badger, ...
Nature 486 (7402), 207, 2012
Metagenomic analysis of the human distal gut microbiome
SR Gill, M Pop, RT DeBoy, PB Eckburg, PJ Turnbaugh, BS Samuel, ...
Science 312 (5778), 1355-1359, 2006
Evolution of genes and genomes on the Drosophila phylogeny
Drosophila 12 Genomes Consortium
Nature 450 (7167), 203, 2007
The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease
NM El-Sayed, PJ Myler, DC Bartholomeu, D Nilsson, G Aggarwal, ...
Science 309 (5733), 409-415, 2005
A framework for human microbiome research
BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ...
Nature 486 (7402), 215, 2012
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
KE Nelson, C Weinel, IT Paulsen, RJ Dodson, H Hilbert, ...
Environmental microbiology 4 (12), 799-808, 2002
Statistical methods for detecting differentially abundant features in clinical metagenomic samples
JR White, N Nagarajan, M Pop
PLoS computational biology 5 (4), 2009
Differential abundance analysis for microbial marker-gene surveys
JN Paulson, OC Stine, HC Bravo, M Pop
Nature methods 10 (12), 1200, 2013
The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria
TD Read, SN Peterson, N Tourasse, LW Baillie, IT Paulsen, KE Nelson, ...
Nature 423 (6935), 81-86, 2003
ARDB—antibiotic resistance genes database
B Liu, M Pop
Nucleic acids research 37 (suppl_1), D443-D447, 2009
The genome of the protist parasite Entamoeba histolytica
B Loftus, I Anderson, R Davies, UCM Alsmark, J Samuelson, P Amedeo, ...
Nature 433 (7028), 865-868, 2005
Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii
JM Carlton, SV Angiuoli, BB Suh, TW Kooij, M Pertea, JC Silva, ...
Nature 419 (6906), 512-519, 2002
GAGE: A critical evaluation of genome assemblies and assembly algorithms
SL Salzberg, AM Phillippy, A Zimin, D Puiu, T Magoc, S Koren, ...
Genome research 22 (3), 557-567, 2012
The dog genome: survey sequencing and comparative analysis
EF Kirkness, V Bafna, AL Halpern, S Levy, K Remington, DB Rusch, ...
Science 301 (5641), 1898-1903, 2003
Draft genome of the filarial nematode parasite Brugia malayi
E Ghedin, S Wang, D Spiro, E Caler, Q Zhao, J Crabtree, JE Allen, ...
Science 317 (5845), 1756-1760, 2007
Bioinformatics challenges of new sequencing technology
M Pop, SL Salzberg
Trends in genetics 24 (3), 142-149, 2008
Searching for SNPs with cloud computing
B Langmead, MC Schatz, J Lin, M Pop, SL Salzberg
Genome biology 10 (11), R134, 2009
Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis
TD Read, SL Salzberg, M Pop, M Shumway, L Umayam, L Jiang, ...
Science 296 (5575), 2028-2033, 2002
Minimus: a fast, lightweight genome assembler
DD Sommer, AL Delcher, SL Salzberg, M Pop
BMC bioinformatics 8 (1), 64, 2007
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