Indika Kahanda

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Nazmul H. KaziUniversity of North FloridaAdresse e-mail validée de unf.edu
Asa Ben-HurComputer Science, Colorado State UniversityAdresse e-mail validée de cs.colostate.edu
Upulee KanewalaAssistant Professor, University of North FloridaAdresse e-mail validée de unf.edu
Christopher FunkPhD student, University of Colorado Medical SchoolAdresse e-mail validée de ucdenver.edu
Brendan MumeyProfessor of Computer Science, Montana State UniversityAdresse e-mail validée de montana.edu
Karin VerspoorExecutive Dean, School of Computing Technologies, RMIT UniversityAdresse e-mail validée de rmit.edu.au
Jennifer NevilleMicrosoft Research, Purdue UniversityAdresse e-mail validée de microsoft.com
Joann MudgeSenior Research Scientist, National Center for Genome Resources (NCGR), Santa Fe, NMAdresse e-mail validée de ncgr.org
Thiruvarangan Ramaraj, PhDAssistant Professor, School of Computing, College of Computing and Digital Media, DePaul UniversityAdresse e-mail validée de depaul.edu
Alan ClearyNational Center for Genome ResourcesAdresse e-mail validée de ncgr.org
Buwani ManuweeraMontana State UniversityAdresse e-mail validée de student.montana.edu
Gillian Lucy ReynoldsSenior Bioinformatician, Earlham InstituteAdresse e-mail validée de earlham.ac.uk
Madhusudan SrinivasanEast Carolina UniversityAdresse e-mail validée de ecu.edu
S. Indu RupassaraFruitVaccine Inc.Adresse e-mail validée de illinois.edu
Diane BimczokMontana State UniversityAdresse e-mail validée de montana.edu
Chaofu LuProfessor, Montana State UniversityAdresse e-mail validée de montana.edu
Jennifer LachowiecAssociate Professor, Montana State UniversityAdresse e-mail validée de montana.edu
Huang LiUniversity of Nebraska-LincolnAdresse e-mail validée de unl.edu
Xiao HuIowa State UniversityAdresse e-mail validée de iastate.edu
Xudong LiuAssociate Professor, School of Computing, University of North FloridaAdresse e-mail validée de unf.edu

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Indika Kahanda

University of North Florida

Adresse e-mail validée de unf.edu - Page d'accueil

Bioinformatics Biomedical Informatics and Medical Informatics


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
An expanded evaluation of protein function prediction methods shows an improvement in accuracy Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ... Genome biology 17, 1-19, 2016	412	2016
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ... Genome biology 20, 1-23, 2019	350	2019
Using transactional information to predict link strength in online social networks I Kahanda, J Neville Proceedings of the International AAAI Conference on Web and Social Media 3 …, 2009	292	2009
PHENOstruct: prediction of human phenotype ontology terms using heterogeneous data sources I Kahanda, C Funk, K Verspoor, A Ben-Hur F1000Research 4, 2015	37	2015
Evaluating a variety of text-mined features for automatic protein function prediction with GOstruct CS Funk, I Kahanda, A Ben-Hur, KM Verspoor Journal of biomedical semantics 6, 1-14, 2015	33	2015
Genetic dissection of natural variation in oilseed traits of camelina by whole‐genome resequencing and QTL mapping H Li, X Hu, JT Lovell, PP Grabowski, S Mamidi, C Chen, M Amirebrahimi, ... The plant genome 14 (2), e20110, 2021	27	2021
Quality assurance of bioinformatics software: a case study of testing a biomedical text processing tool using metamorphic testing M Srinivasan, MP Shahri, I Kahanda, U Kanewala Proceedings of the 3rd International Workshop on Metamorphic Testing, 26-33, 2018	22	2018
A close look at protein function prediction evaluation protocols I Kahanda, CS Funk, F Ullah, KM Verspoor, A Ben-Hur GigaScience 4 (1), s13742-015-0082-5, 2015	20	2015
Metamorphic testing for quality assurance of protein function prediction tools MP Shahri, M Srinivasan, G Reynolds, D Bimczok, I Kahanda, ... 2019 IEEE International Conference On Artificial Intelligence Testing …, 2019	17	2019
Pangenome-wide association studies with frequented regions B Manuweera, J Mudge, I Kahanda, B Mumey, T Ramaraj, A Cleary Proceedings of the 10th ACM International Conference on Bioinformatics …, 2019	16	2019
Automatically generating psychiatric case notes from digital transcripts of doctor-patient conversations N Kazi, I Kahanda Proceedings of the 2nd Clinical Natural Language Processing Workshop, 140-148, 2019	14	2019
Gostruct 2.0: Automated protein function prediction for annotated proteins I Kahanda, A Ben-Hur Proceedings of the 8th ACM International Conference on Bioinformatics …, 2017	14	2017
DeepACPpred: a novel hybrid CNN-RNN architecture for predicting anti-cancer peptides N Lane, I Kahanda Practical Applications of Computational Biology & Bioinformatics, 14th …, 2021	12	2021
Exploring frequented regions in pan-genomic graphs A Cleary, I Kahanda, B Mumey, J Mudge, T Ramaraj Proceedings of the 8th ACM International Conference on Bioinformatics …, 2017	12	2017
Relational similarity model for suggesting friends in online social networks M Mohajireen, C Ellepola, M Perera, I Kahanda, U Kanewala 2011 6th International Conference on Industrial and Information Systems, 334-339, 2011	10	2011
PPPred: Classifying protein-phenotype co-mentions extracted from biomedical literature M Pourreza Shahri, G Reynolds, MM Roe, I Kahanda Proceedings of the 10th ACM international conference on bioinformatics …, 2019	9	2019
Extracting Co-mention Features from Biomedical Literature for Automated Protein Phenotype Prediction using PHENOstruct MP Shahri, I Kahanda International Conference on Bioinformatics and Computational Biology, 2018	9*	2018
MRpredT: Using text mining for metamorphic relation prediction K Rahman, I Kahanda, U Kanewala Proceedings of the IEEE/ACM 42nd International Conference on Software …, 2020	7	2020
ProPheno 1.0: An online dataset for accelerating the complete characterization of the human protein-phenotype landscape in biomedical literature MP Shahri, I Kahanda 2020 IEEE 14th International Conference on Semantic Computing (ICSC), 416-423, 2020	7	2020
Overview of the BioCreative VI text-mining services for Kinome Curation Track J Gobeill, P Gaudet, D Dopp, A Morrone, I Kahanda, YY Hsu, CH Wei, ... Database 2018, bay104, 2018	7	2018

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