James Tiedje
James Tiedje
Professor of Plant, Soil and Microbial Sciences and of Microbiology and Molecular Genetics, Michigan
Verified email at msu.edu
Title
Cited by
Cited by
Year
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
Q Wang, GM Garrity, JM Tiedje, JR Cole
Applied and environmental microbiology 73 (16), 5261-5267, 2007
137732007
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
JR Cole, Q Wang, E Cardenas, J Fish, B Chai, RJ Farris, ...
Nucleic acids research 37 (suppl_1), D141-D145, 2009
48622009
DNA recovery from soils of diverse composition
J Zhou, MA Bruns, JM Tiedje
Applied and environmental microbiology 62 (2), 316-322, 1996
36091996
The RDP (ribosomal database project) continues
BL Maidak, JR Cole, TG Lilburn, CT Parker Jr, PR Saxman, JM Stredwick, ...
Nucleic acids research 28 (1), 173-174, 2000
3014*2000
Ribosomal Database Project: data and tools for high throughput rRNA analysis
JR Cole, Q Wang, JA Fish, B Chai, DM McGarrell, Y Sun, CT Brown, ...
Nucleic acids research 42 (D1), D633-D642, 2014
29202014
DNA–DNA hybridization values and their relationship to whole-genome sequence similarities
J Goris, KT Konstantinidis, JA Klappenbach, T Coenye, P Vandamme, ...
International journal of systematic and evolutionary microbiology 57 (1), 81-91, 2007
28532007
Ecology of denitrification and dissimilatory nitrate reduction to ammonium
JM Tiedje
Biology of anaerobic microorganisms, 179-244, 1988
19621988
The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
JR Cole, B Chai, RJ Farris, Q Wang, SA Kulam, DM McGarrell, GM Garrity, ...
Nucleic acids research 33 (suppl_1), D294-D296, 2005
16602005
Tansley review no. 95 15N natural abundance in soil–plant systems
P Högberg
The New Phytologist 137 (2), 179-203, 1997
16351997
The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
JR Cole, B Chai, TL Marsh, RJ Farris, Q Wang, SA Kulam, S Chandra, ...
Nucleic acids research 31 (1), 442-443, 2003
16242003
Genomic insights that advance the species definition for prokaryotes
KT Konstantinidis, JM Tiedje
Proceedings of the National Academy of Sciences 102 (7), 2567-2572, 2005
15912005
Diverse and abundant antibiotic resistance genes in Chinese swine farms
YG Zhu, TA Johnson, JQ Su, M Qiao, GX Guo, RD Stedtfeld, ...
Proceedings of the National Academy of Sciences 110 (9), 3435-3440, 2013
15422013
The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
JR Cole, B Chai, RJ Farris, Q Wang, AS Kulam-Syed-Mohideen, ...
Nucleic acids research 35 (suppl_1), D169-D172, 2007
12282007
Denitrification
JM Tiedje
Methods of Soil Analysis: Part 2 Chemical and Microbiological Properties 9 …, 1983
1051*1983
A new version of the RDP (Ribosomal Database Project)
BL Maidak, JR Cole, CT Parker Jr, GM Garrity, N Larsen, B Li, TG Lilburn, ...
Nucleic acids research 27 (1), 171-173, 1999
9951999
Microbial reductive dehalogenation
WW Mohn, JM Tiedje
Microbiological reviews 56 (3), 482-507, 1992
9921992
Towards environmental systems biology of Shewanella
JK Fredrickson, MF Romine, AS Beliaev, JM Auchtung, ME Driscoll, ...
Nature Reviews Microbiology 6 (8), 592-603, 2008
8552008
The planned introduction of genetically engineered organisms: ecological considerations and recommendations
JM Tiedje, RK Colwell, YL Grossman, RE Hodson, RE Lenski, RN Mack, ...
Ecology 70 (2), 298-315, 1989
8131989
Phases of denitrification following oxygen depletion in soil
MS Smith, JM Tiedje
Soil Biology and Biochemistry 11 (3), 261-267, 1979
7931979
In-feed antibiotic effects on the swine intestinal microbiome
T Looft, TA Johnson, HK Allen, DO Bayles, DP Alt, RD Stedtfeld, WJ Sul, ...
Proceedings of the National Academy of Sciences 109 (5), 1691-1696, 2012
7582012
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