Shinichi Sunagawa

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Citations	30305	25127
h-index	62	59
i10-index	96	93

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Peer BorkEMBLVerified email at embl.de
Daniel R. MendeAsst. Professor, Amsterdam University Medical Center, University of AmsterdamVerified email at amsterdamumc.nl
Monica MedinaProfessor of Biology, Penn State UniversityVerified email at psu.edu
Georg ZellerEMBL, HeidelbergVerified email at embl.de
Jaime Huerta-CepasGroup Leader at CBGP (UPM-INIA), Madrid, SpainVerified email at embl.de
Luis Pedro CoelhoISTBI, Fudan UniversityVerified email at fudan.edu.cn
Michael K. DeSalvoVerified email at ucmerced.edu
Christian R VoolstraUniversity of Konstanz / King Abdullah University of Science and Technology (KAUST)Verified email at uni-konstanz.de
Sofia K. ForslundJunior Group Leader, ECRC (joint Max Delbrück Center and Charité University Hospital unit), BerlinVerified email at embl.de
Jens Roat KultimaDanish Competition and Consumer Agency; Bioinformatics and Economic Fraud SpecialistVerified email at kfst.dk
Manimozhiyan ArumugamAssociate Professor, Faculty of Health and Medical Sciences, University of CopenhagenVerified email at sund.ku.dk
Paul Igor CosteaBASFVerified email at basf.com
Karsenti EricSenior scientist EMBLVerified email at embl.de
Alison S. WallerBrock UniversityVerified email at brocku.ca
Guillem SalazarInstitute of Microbiology - ETH ZurichVerified email at ethz.ch
Jeroen RaesProfessor, Faculty of Medicine, Rega Institute, KU Leuven; Group Leader Microbiome, VIB, BelgiumVerified email at med.kuleuven.be
Pascal HingampAssociate Professor, Aix Marseille University, FranceVerified email at univ-amu.fr
Hiroyuki OgataInstitute for Chemical Research, Kyoto UniversityVerified email at kuicr.kyoto-u.ac.jp
Julien TapDanone ResearchVerified email at danone.com
Gipsi Lima MendezSenior Computational Biologist, UCLouvain, BelgiumVerified email at uclouvain.be

Shinichi Sunagawa

ETH Zurich; Swiss Institute of Bioinformatics; ETH AI Center

Verified email at ethz.ch - Homepage

Eco-Systems Biology Microbiome Research Bioinformatics Computational Biology


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Enterotypes of the human gut microbiome M Arumugam, J Raes, E Pelletier, D Le Paslier, T Yamada, DR Mende, ... Nature 473 (7346), 174-180, 2011	5735	2011
Richness of human gut microbiome correlates with metabolic markers E Le Chatelier, T Nielsen, J Qin, E Prifti, F Hildebrand, G Falony, ... Nature 500 (7464), 541-546, 2013	3084	2013
Structure and function of the global ocean microbiome S Sunagawa, LP Coelho, S Chaffron, JR Kultima, K Labadie, G Salazar, ... Science 348 (6237), 2015	1367	2015
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences J Huerta-Cepas, D Szklarczyk, K Forslund, H Cook, D Heller, MC Walter, ... Nucleic acids research 44 (D1), D286-D293, 2016	1359	2016
An integrated catalog of reference genes in the human gut microbiome J Li, H Jia, X Cai, H Zhong, Q Feng, S Sunagawa, M Arumugam, ... Nature biotechnology 32 (8), 834-841, 2014	1231	2014
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota K Forslund, F Hildebrand, T Nielsen, G Falony, E Le Chatelier, ... Nature 528 (7581), 262-266, 2015	1219	2015
Eukaryotic plankton diversity in the sunlit ocean C De Vargas, S Audic, N Henry, J Decelle, F Mahé, R Logares, E Lara, ... Science 348 (6237), 2015	1106	2015
Human gut microbes impact host serum metabolome and insulin sensitivity HK Pedersen, V Gudmundsdottir, HB Nielsen, T Hyotylainen, T Nielsen, ... Nature 535 (7612), 376-381, 2016	950	2016
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ... Nature biotechnology 32 (8), 822-828, 2014	701	2014
Genomic variation landscape of the human gut microbiome S Schloissnig, M Arumugam, S Sunagawa, M Mitreva, J Tap, A Zhu, ... Nature 493 (7430), 45-50, 2013	678	2013
Potential of fecal microbiota for early‐stage detection of colorectal cancer G Zeller, J Tap, AY Voigt, S Sunagawa, JR Kultima, PI Costea, A Amiot, ... Molecular systems biology 10 (11), 766, 2014	594	2014
Structure and function of the global topsoil microbiome M Bahram, F Hildebrand, SK Forslund, JL Anderson, NA Soudzilovskaia, ... Nature 560 (7717), 233-237, 2018	534	2018
Determinants of community structure in the global plankton interactome G Lima-Mendez, K Faust, N Henry, J Decelle, S Colin, F Carcillo, ... Science 348 (6237), 2015	530	2015
Salt-responsive gut commensal modulates TH 17 axis and disease N Wilck, MG Matus, SM Kearney, SW Olesen, K Forslund, ... Nature 551 (7682), 585-589, 2017	528	2017
Patterns and ecological drivers of ocean viral communities JR Brum, JC Ignacio-Espinoza, S Roux, G Doulcier, SG Acinas, A Alberti, ... Science 348 (6237), 2015	479	2015
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses S Roux, JR Brum, BE Dutilh, S Sunagawa, MB Duhaime, A Loy, ... Nature 537, 689–693, 2016	417	2016
Enterotypes in the landscape of gut microbial community composition PI Costea, F Hildebrand, M Arumugam, F Bäckhed, MJ Blaser, ... Nature microbiology 3 (1), 8-16, 2018	407	2018
Plankton networks driving carbon export in the oligotrophic ocean L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ... Nature 532 (7600), 465-470, 2016	406	2016
Differential gene expression during thermal stress and bleaching in the Caribbean coral Montastraea faveolata MK Desalvo, CR Voolstra, S Sunagawa, JA Schwarz, JH Stillman, ... Molecular ecology 17 (17), 3952-3971, 2008	402	2008
Metagenomic species profiling using universal phylogenetic marker genes S Sunagawa, DR Mende, G Zeller, F Izquierdo-Carrasco, SA Berger, ... Nature methods 10 (12), 1196-1199, 2013	376	2013

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