Shinichi Sunagawa - Google Scholar

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Citations	22983	19620
h-index	53	52
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Co-authors

Peer BorkEMBLVerified email at embl.de
Monica MedinaProfessor of Biology, Penn State UniversityVerified email at psu.edu
Daniel R. MendeAsst. Professor, Amsterdam University Medical Center, University of AmsterdamVerified email at amsterdamumc.nl
Michael K. DeSalvoVerified email at ucmerced.edu
Christian R VoolstraUniversity of Konstanz / King Abdullah University of Science and Technology (KAUST)Verified email at uni-konstanz.de
Jaime Huerta-CepasGroup Leader at CBGP (UPM-INIA), Madrid, SpainVerified email at embl.de
Georg ZellerEMBL, HeidelbergVerified email at embl.de
Luis Pedro CoelhoISTBI, Fudan UniversityVerified email at fudan.edu.cn
Jens Roat KultimaDirector of Bioinformatics at Clinical MicrobiomicsVerified email at clinical-microbiomics.com
Sofia K. ForslundJunior Group Leader, ECRC (joint Max Delbrück Center and Charité University Hospital unit), BerlinVerified email at embl.de
Manimozhiyan ArumugamAssociate Professor, Faculty of Health and Medical Sciences, University of CopenhagenVerified email at sund.ku.dk
Paul Igor CosteaBASFVerified email at basf.com
Karsenti EricSenior scientist EMBLVerified email at embl.de
Jeroen RaesProfessor, Faculty of Medicine, Rega Institute, KU Leuven; Group Leader Microbiome, VIB, BelgiumVerified email at med.kuleuven.be
Pascal HingampAssociate Professor, Aix Marseille University, FranceVerified email at univ-amu.fr
Guillem SalazarInstitute of Microbiology - ETH ZurichVerified email at ethz.ch
Alison S. WallerBrock UniversityVerified email at brocku.ca
Julien TapDanone ResearchVerified email at danone.com
Gipsi Lima MendezSenior Computational Biologist, UCLouvain, BelgiumVerified email at uclouvain.be
Hiroyuki OgataInstitute for Chemical Research, Kyoto UniversityVerified email at kuicr.kyoto-u.ac.jp

Shinichi Sunagawa

Assistant Professor of Microbiome Research, Institute of Microbiology, ETH Zurich

Verified email at ethz.ch - Homepage

Eco-Systems Biology Ocean Microbiome Human Microbiome Bioinformatics Computational Biology


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Enterotypes of the human gut microbiome M Arumugam, J Raes, E Pelletier, D Le Paslier, T Yamada, DR Mende, ... Nature 473 (7346), 174-180, 2011	4898	2011
Richness of human gut microbiome correlates with metabolic markers E Le Chatelier, T Nielsen, J Qin, E Prifti, F Hildebrand, G Falony, ... Nature 500 (7464), 541-546, 2013	2466	2013
Structure and function of the global ocean microbiome S Sunagawa, LP Coelho, S Chaffron, JR Kultima, K Labadie, G Salazar, ... Science 348 (6237), 2015	1019	2015
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences J Huerta-Cepas, D Szklarczyk, K Forslund, H Cook, D Heller, MC Walter, ... Nucleic acids research 44 (D1), D286-D293, 2016	1005	2016
An integrated catalog of reference genes in the human gut microbiome J Li, H Jia, X Cai, H Zhong, Q Feng, S Sunagawa, M Arumugam, ... Nature biotechnology 32 (8), 834-841, 2014	956	2014
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota K Forslund, F Hildebrand, T Nielsen, G Falony, E Le Chatelier, ... Nature 528 (7581), 262-266, 2015	895	2015
Eukaryotic plankton diversity in the sunlit ocean C De Vargas, S Audic, N Henry, J Decelle, F Mahé, R Logares, E Lara, ... Science 348 (6237), 2015	874	2015
Human gut microbes impact host serum metabolome and insulin sensitivity HK Pedersen, V Gudmundsdottir, HB Nielsen, T Hyotylainen, T Nielsen, ... Nature 535 (7612), 376-381, 2016	641	2016
Genomic variation landscape of the human gut microbiome S Schloissnig, M Arumugam, S Sunagawa, M Mitreva, J Tap, A Zhu, ... Nature 493 (7430), 45-50, 2013	560	2013
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ... Nature biotechnology 32 (8), 822-828, 2014	558	2014
Potential of fecal microbiota for early‐stage detection of colorectal cancer G Zeller, J Tap, AY Voigt, S Sunagawa, JR Kultima, PI Costea, A Amiot, ... Molecular systems biology 10 (11), 766, 2014	460	2014
Determinants of community structure in the global plankton interactome G Lima-Mendez, K Faust, N Henry, J Decelle, S Colin, F Carcillo, ... Science 348 (6237), 2015	408	2015
Patterns and ecological drivers of ocean viral communities JR Brum, JC Ignacio-Espinoza, S Roux, G Doulcier, SG Acinas, A Alberti, ... Science 348 (6237), 2015	372	2015
Differential gene expression during thermal stress and bleaching in the Caribbean coral Montastraea faveolata MK Desalvo, CR Voolstra, S Sunagawa, JA Schwarz, JH Stillman, ... Molecular ecology 17 (17), 3952-3971, 2008	360	2008
Metagenomic species profiling using universal phylogenetic marker genes S Sunagawa, DR Mende, G Zeller, F Izquierdo-Carrasco, SA Berger, ... Nature methods 10 (12), 1196-1199, 2013	319	2013
Salt-responsive gut commensal modulates TH 17 axis and disease N Wilck, MG Matus, SM Kearney, SW Olesen, K Forslund, ... Nature 551 (7682), 585-589, 2017	314	2017
Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata S Sunagawa, TZ DeSantis, YM Piceno, EL Brodie, MK DeSalvo, ... The ISME journal 3 (5), 512-521, 2009	313	2009
A Holistic Approach to Marine Eco-Systems Biology E Karsenti, SG Acinas, P Bork, C Bowler, C De Vargas, J Raes, M Sullivan, ... PLoS Biology 9 (10), e1001177, 2011	304	2011
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses S Roux, JR Brum, BE Dutilh, S Sunagawa, MB Duhaime, A Loy, ... Nature 537, 689–693, 2016	300	2016
Plankton networks driving carbon export in the oligotrophic ocean L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ... Nature 532 (7600), 465-470, 2016	295	2016

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