| Phylogenetic ctDNA analysis depicts early-stage lung cancer evolution C Abbosh, NJ Birkbak, GA Wilson, M Jamal-Hanjani, T Constantin, ... Nature 545 (7655), 446-451, 2017 | 788 | 2017 |
| Mutations in early follicular lymphoma progenitors are associated with suppressed antigen presentation MR Green, S Kihira, CL Liu, RV Nair, R Salari, AJ Gentles, J Irish, H Stehr, ... Proceedings of the National Academy of Sciences 112 (10), E1116-E1125, 2015 | 219 | 2015 |
| Analysis of plasma cell-free DNA by ultradeep sequencing in patients with stages I to III colorectal cancer T Reinert, TV Henriksen, E Christensen, S Sharma, R Salari, H Sethi, ... JAMA oncology 5 (8), 1124-1131, 2019 | 172 | 2019 |
| Fast and scalable inference of multi-sample cancer lineages V Popic, R Salari, I Hajirasouliha, D Kashef-Haghighi, RB West, ... Genome biology 16 (1), 1-17, 2015 | 160 | 2015 |
| Detection of ubiquitous and heterogeneous mutations in cell-free DNA from patients with early-stage non-small-cell lung cancer M Jamal-Hanjani, GA Wilson, S Horswell, R Mitter, O Sakarya, ... Annals of Oncology 27 (5), 862-867, 2016 | 150 | 2016 |
| A partition function algorithm for interacting nucleic acid strands H Chitsaz, R Salari, SC Sahinalp, R Backofen Bioinformatics 25 (12), i365-i373, 2009 | 118 | 2009 |
| Early detection of metastatic relapse and monitoring of therapeutic efficacy by ultra-deep sequencing of plasma cell-free DNA in patients with urothelial bladder carcinoma E Christensen, K Birkenkamp-Demtröder, H Sethi, S Shchegrova, R Salari, ... Journal of Clinical Oncology 37 (18), 1547-1557, 2019 | 109 | 2019 |
| Personalized detection of circulating tumor DNA antedates breast cancer metastatic recurrence RC Coombes, K Page, R Salari, RK Hastings, A Armstrong, S Ahmed, ... Clinical Cancer Research 25 (14), 4255-4263, 2019 | 94 | 2019 |
| Genome evolution during progression to breast cancer DE Newburger, D Kashef-Haghighi, Z Weng, R Salari, RT Sweeney, ... Genome research 23 (7), 1097-1108, 2013 | 94 | 2013 |
| Inferring cancer subnetwork markers using density-constrained biclustering P Dao, R Colak, R Salari, F Moser, E Davicioni, A Schönhuth, M Ester Bioinformatics 26 (18), i625-i631, 2010 | 69 | 2010 |
| Sensitive measurement of single-nucleotide polymorphism-induced changes of RNA conformation: application to disease studies R Salari, C Kimchi-Sarfaty, MM Gottesman, TM Przytycka Nucleic acids research 41 (1), 44-53, 2013 | 61 | 2013 |
| Characterization of coding synonymous and non-synonymous variants in ADAMTS13 using ex vivo and in silico approaches NC Edwards, ZA Hing, A Perry, A Blaisdell, DB Kopelman, R Fathke, ... PLoS One 7 (6), e38864, 2012 | 56 | 2012 |
| Fast prediction of RNA-RNA interaction R Salari, R Backofen, SC Sahinalp Algorithms for molecular Biology 5 (1), 1-10, 2010 | 54 | 2010 |
| Time and space efficient RNA-RNA interaction prediction via sparse folding R Salari, M Möhl, S Will, SC Sahinalp, R Backofen Annual International Conference on Research in Computational Molecular …, 2010 | 45 | 2010 |
| Protein-protein interaction network evaluation for identifying potential drug targets F Hormozdiari, R Salari, V Bafna, SC Sahinalp Journal of Computational Biology 17 (5), 669-684, 2010 | 38 | 2010 |
| Abstract PD2-01: Personalized serial circulating tumor DNA (ctDNA) analysis in high-risk early stage breast cancer patients to monitor and predict response to neoadjuvant … MJM Magbanua, L Brown-Swigart, GL Hirst, C Yau, D Wolf, AA Ma, ... Cancer Research 79 (4 Supplement), PD2-01-PD2-01, 2019 | 32 | 2019 |
| Methods and compositions for determining ploidy HE Kirkizlar, R Salari, S Sigurjonsson, B Zimmermann, A Ryan, ... US Patent App. 15/573,800, 2018 | 31 | 2018 |
| Module cover–a new approach to genotype-phenotype studies YA Kim, R Salari, S Wuchty, TM Przytycka Biocomputing 2013, 135-146, 2013 | 29 | 2013 |
| Sparsification of RNA structure prediction including pseudoknots M Möhl, R Salari, S Will, R Backofen, SC Sahinalp Algorithms for Molecular Biology 5 (1), 1-10, 2010 | 28 | 2010 |
| The effect of insertions and deletions on wirings in protein-protein interaction networks: a large-scale study F Hormozdiari, R Salari, M Hsing, A Schönhuth, SK Chan, SC Sahinalp, ... Journal of Computational Biology 16 (2), 159-167, 2009 | 28 | 2009 |
Teresa PrzytyckaNCBI / NLM / NIHVerified email at ncbi.nlm.nih.gov
