Beth Shapiro

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Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
Simon HoProfessor of Molecular Evolution, University of SydneyVerified email at sydney.edu.au
M Thomas P GilbertUniversity of CopenhagenVerified email at snm.ku.dk
Richard E. GreenAssoc. Prof of Biomolecular Engineering, UCSC, UC Santa Cruz Genomics InstituteVerified email at soe.ucsc.edu
Eske WillerslevCentre for GeoGenetics, University of CopenhagenVerified email at snm.ku.dk
Alexei J. DrummondProfessor of Computational Biology, University of AucklandVerified email at cs.auckland.ac.nz
Peter D. HeintzmanUniversity Museum, UiT - The Arctic University of NorwayVerified email at uit.no
James A. CahillLecturer and PI, University of FloridaVerified email at ufl.edu
Philippe LemeyAssociate Professor, KU LeuvenVerified email at kuleuven.be
Oliver PybusUniversity of Oxford / Royal Veterinary CollegeVerified email at zoo.ox.ac.uk
Ian BarnesProfessor of Molecular Palaeobiology, Natural History MuseumVerified email at nhm.ac.uk
Michael HofreiterProfessor for Evolutionary Biology and Ecology, The University of YorkVerified email at palaeo.eu
Tara FultonEnvironment and Climate Change CanadaVerified email at ualberta.ca
Mathias StillerInstitute of Pathology, University Leipzig, GermanyVerified email at medizin.uni-leipzig.de
Ludovic OrlandoCentre for Anthropobiology & Genomics of Toulouse, CNRS/Univ Paul SabatierVerified email at univ-tlse3.fr
André Elias Rodrigues SoaresHuman Evolution Program, Department of Organismal Biology, Uppsala University, SwedenVerified email at ebc.uu.se
Ross MacPheeCurator of Mammals, American Museum of Natural HistoryVerified email at amnh.org
Ross BarnettCopenhagen UniversityVerified email at snm.ku.dk
Michael BunceChief Scientist, New Zealand Environmental Protection Authority (EPA)Verified email at epa.govt.nz
Marc A. SuchardProfessor, University of California, Los AngelesVerified email at ucla.edu

Beth Shapiro

UC Santa Cruz Genomics Institute; Ecology and Evolutionary Biology, UC Santa Cruz

Verified email at ucsc.edu

ancient DNA genomics molecular ecology


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Bayesian coalescent inference of past population dynamics from molecular sequences AJ Drummond, A Rambaut, B Shapiro, OG Pybus Molecular biology and evolution 22 (5), 1185-1192, 2005	2727	2005
Whole-genome analyses resolve early branches in the tree of life of modern birds ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ... Science 346 (6215), 1320-1331, 2014	1385	2014
Rise and fall of the Beringian steppe bison B Shapiro, AJ Drummond, A Rambaut, MC Wilson, PE Matheus, AV Sher, ... Science 306 (5701), 1561-1565, 2004	706	2004
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse L Orlando, A Ginolhac, G Zhang, D Froese, A Albrechtsen, M Stiller, ... Nature 499 (7456), 74-78, 2013	705	2013
Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA HN Poinar, C Schwarz, J Qi, B Shapiro, RDE MacPhee, B Buigues, ... science 311 (5759), 392-394, 2006	692	2006
Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences B Shapiro, A Rambaut, AJ Drummond Molecular biology and evolution 23 (1), 7-9, 2006	681	2006
Diverse plant and animal genetic records from Holocene and Pleistocene sediments E Willerslev, AJ Hansen, J Binladen, TB Brand, MTP Gilbert, B Shapiro, ... Science 300 (5620), 791-795, 2003	614	2003
Species-specific responses of Late Quaternary megafauna to climate and humans ED Lorenzen, D Nogués-Bravo, L Orlando, J Weinstock, J Binladen, ... Nature 479 (7373), 359-364, 2011	594	2011
Complete mitochondrial genomes of ancient canids suggest a European origin of domestic dogs O Thalmann, B Shapiro, P Cui, VJ Schuenemann, SK Sawyer, ... Science 342 (6160), 871-874, 2013	502	2013
Skyline‐plot methods for estimating demographic history from nucleotide sequences SYW Ho, B Shapiro Molecular ecology resources 11 (3), 423-434, 2011	400	2011
Dynamics of Pleistocene population extinctions in Beringian brown bears I Barnes, P Matheus, B Shapiro, D Jensen, A Cooper Science 295 (5563), 2267-2270, 2002	384	2002
Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci MS Gill, P Lemey, NR Faria, A Rambaut, B Shapiro, MA Suchard Molecular biology and evolution 30 (3), 713-724, 2013	329	2013
The earliest evidence for anatomically modern humans in northwestern Europe T Higham, T Compton, C Stringer, R Jacobi, B Shapiro, E Trinkaus, ... Nature 479 (7374), 521-524, 2011	322	2011
Mitochondrial DNA analysis shows a Near Eastern Neolithic origin for domestic cattle and no indication of domestication of European aurochs CJ Edwards, R Bollongino, A Scheu, A Chamberlain, A Tresset, JD Vigne, ... Proceedings of the Royal Society B: Biological Sciences 274 (1616), 1377-1385, 2007	280	2007
Evidence for time dependency of molecular rate estimates SYW Ho, B Shapiro, MJ Phillips, A Cooper, AJ Drummond Systematic biology 56 (3), 515-522, 2007	278	2007
The global spread of hepatitis C virus 1a and 1b: a phylodynamic and phylogeographic analysis G Magiorkinis, E Magiorkinis, D Paraskevis, SYW Ho, B Shapiro, ... PLoS Med 6 (12), e1000198, 2009	240	2009
Prehistoric genomes reveal the genetic foundation and cost of horse domestication M Schubert, H Jónsson, D Chang, C Der Sarkissian, L Ermini, A Ginolhac, ... Proceedings of the National Academy of Sciences 111 (52), E5661-E5669, 2014	235	2014
Ancient hybridization and an Irish origin for the modern polar bear matriline CJ Edwards, MA Suchard, P Lemey, JJ Welch, I Barnes, TL Fulton, ... Current biology 21 (15), 1251-1258, 2011	232	2011
The effect of inappropriate calibration: three case studies in molecular ecology SYW Ho, U Saarma, R Barnett, J Haile, B Shapiro PLoS One 3 (2), e1615, 2008	224	2008
Insights into the evolutionary history of an emerging livestock pathogen: porcine circovirus 2 C Firth, MA Charleston, S Duffy, B Shapiro, EC Holmes Journal of virology 83 (24), 12813-12821, 2009	217	2009

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