| The origins and potential future of SARS-CoV-2 variants of concern in the evolving COVID-19 pandemic SP Otto, T Day, J Arino, C Colijn, J Dushoff, M Li, S Mechai, ... Current Biology 31 (14), R918-R929, 2021 | 320 | 2021 |
| Reconciling early-outbreak estimates of the basic reproductive number and its uncertainty: framework and applications to the novel coronavirus (SARS-CoV-2) outbreak SW Park, BM Bolker, D Champredon, DJD Earn, M Li, JS Weitz, ... Journal of the Royal Society Interface 17 (168), 20200144, 2020 | 141 | 2020 |
| A wastewater-based epidemic model for SARS-CoV-2 with application to three Canadian cities S Nourbakhsh, A Fazil, M Li, CS Mangat, SW Peterson, J Daigle, ... Epidemics 39, 100560, 2022 | 63 | 2022 |
| Forward-looking serial intervals correctly link epidemic growth to reproduction numbers SW Park, K Sun, D Champredon, M Li, BM Bolker, DJD Earn, JS Weitz, ... Proceedings of the National Academy of Sciences 118 (2), e2011548118, 2021 | 55 | 2021 |
| Bounding the levels of transmissibility & immune evasion of the Omicron variant in South Africa CAB Pearson, SP Silal, MWZ Li, J Dushoff, BM Bolker, S Abbott, ... MedRxiv, 2021.12. 19.21268038, 2021 | 46 | 2021 |
| Incorporating periodic variability in hidden Markov models for animal movement M Li, BM Bolker Movement ecology 5, 1-12, 2017 | 44 | 2017 |
| Fitting mechanistic epidemic models to data: A comparison of simple Markov chain Monte Carlo approaches M Li, J Dushoff, BM Bolker Statistical methods in medical research 27 (7), 1956-1967, 2018 | 43 | 2018 |
| Evidence that promotion of male circumcision did not lead to sexual risk compensation in prioritized Sub-Saharan countries CF Shi, M Li, J Dushoff PloS one 12 (4), e0175928, 2017 | 33 | 2017 |
| Age-dependence of healthcare interventions for COVID-19 in Ontario, Canada I Papst, M Li, D Champredon, BM Bolker, J Dushoff, DJ D. Earn BMC Public Health 21, 1-9, 2021 | 22 | 2021 |
| Two approaches to forecast Ebola synthetic epidemics D Champredon, M Li, BM Bolker, J Dushoff Epidemics 22, 36-42, 2018 | 20 | 2018 |
| First Nations Health: The need for linked genomic surveillance of SARS-CoV-2 C Colijn, DJD Earn, J Dushoff, NH Ogden, M Li, N Knox, ... Canada Communicable Disease Report 48 (4), 131, 2022 | 17 | 2022 |
| Wzmli/phyloglmm: First release of phylogenetic comparative analysis in lme4-verse (version v1. 0.0) M Li, B Bolker Zenodo. 1, 1, 2019 | 8 | 2019 |
| Cohort-based approach to understanding the roles of generation and serial intervals in shaping epidemiological dynamics SW Park, K Sun, D Champredon, M Li, BM Bolker, DJD Earn, JS Weitz, ... | 5 | 2020 |
| Traditional male circumcision is associated with sexual risk behaviors in sub-Saharan countries prioritized for male circumcision C Shi, M Li, J Dushoff AIDS and Behavior 24 (3), 951-959, 2020 | 5 | 2020 |
| Patterns of seasonal and pandemic influenza-associated health care and mortality in Ontario, Canada M Li, BM Bolker, J Dushoff, J Ma, DJD Earn BMC public health 19, 1-9, 2019 | 5 | 2019 |
| Toward a comprehensive system for constructing compartmental epidemic models D Flynn-Primrose, SC Walker, M Li, BM Bolker, DJD Earn, J Dushoff arXiv preprint arXiv:2307.10308, 2023 | 1 | 2023 |
| Cohort-based approach to understanding the roles of generation and serial intervals in shaping epidemiological dynamics (preprint) SW Park, K Sun, D Champredon, M Li, B Bolker, D Earn, J Weitz, ... | 1 | 2020 |
| Reassessing global historical R0 estimates of canine rabies M Li, M Roswell, K Hampson, B Bolker, J Dushoff bioRxiv, 2024.04. 11.589097, 2024 | | 2024 |
| Exploring the dynamics of the 2022 mpox outbreak in Canada RM Milwid, M Li, A Fazil, M Maheu‐Giroux, CM Doyle, Y Xia, J Cox, ... Journal of Medical Virology 95 (12), e29256, 2023 | | 2023 |
| Immune boosting bridges leaky and polarized vaccination models SW Park, M Li, CJ E. Metcalf, BT Grenfell, J Dushoff medRxiv, 2023.07. 14.23292670, 2023 | | 2023 |
Jonathan DushoffProfessor of Biology, McMaster UniversityVerified email at mcmaster.ca
