Jian Carrot-Zhang
Jian Carrot-Zhang
Broad Institute
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Germline and somatic SMARCA4 mutations characterize small cell carcinoma of the ovary, hypercalcemic type
L Witkowski, J Carrot-Zhang, S Albrecht, S Fahiminiya, N Hamel, ...
Nature genetics 46 (5), 438-443, 2014
Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing
SR Viswanathan, G Ha, AM Hoff, JA Wala, J Carrot-Zhang, CW Whelan, ...
Cell 174 (2), 433-447. e19, 2018
Germline RECQL mutations are associated with breast cancer susceptibility
C Cybulski, J Carrot-Zhang, W Kluźniak, B Rivera, A Kashyap, ...
Nature genetics 47 (6), 643-646, 2015
Comprehensive analysis of genetic ancestry and its molecular correlates in cancer
J Carrot-Zhang, N Chambwe, JS Damrauer, TA Knijnenburg, ...
Cancer Cell 37 (5), 639-654. e6, 2020
Germline and somatic FGFR1 abnormalities in dysembryoplastic neuroepithelial tumors
B Rivera, T Gayden, J Carrot-Zhang, J Nadaf, T Boshari, D Faury, ...
Acta neuropathologica 131, 847-863, 2016
Genomic and immune profiling of pre-invasive lung adenocarcinoma
H Chen, J Carrot-Zhang, Y Zhao, H Hu, SS Freeman, S Yu, G Ha, ...
Nature communications 10 (1), 5472, 2019
Divergent transcriptomic responses to repeated and single cold exposures in Drosophila melanogaster
J Zhang, KE Marshall, JT Westwood, MS Clark, BJ Sinclair
Journal of Experimental Biology 214 (23), 4021-4029, 2011
Cole-Carpenter syndrome is caused by a heterozygous missense mutation in P4HB
F Rauch, S Fahiminiya, J Majewski, J Carrot-Zhang, S Boudko, F Glorieux, ...
The American Journal of Human Genetics 96 (3), 425-431, 2015
Genetic ancestry contributes to somatic mutations in lung cancers from admixed Latin American populations
J Carrot-Zhang, G Soca-Chafre, N Patterson, AR Thorner, A Nag, ...
Cancer discovery 11 (3), 591-598, 2021
Familial rhabdoid tumour 'avant la lettre'—from pathology review to exome sequencing and back again
L Witkowski, E Lalonde, J Zhang, S Albrecht, N Hamel, L Cavallone, ...
The Journal of pathology 231 (1), 35-43, 2013
Genomic profiling of prostate cancers from men with African and European ancestry
Y Koga, H Song, ZR Chalmers, J Newberg, E Kim, J Carrot-Zhang, D Piou, ...
Clinical Cancer Research 26 (17), 4651-4660, 2020
Ancestry-driven recalibration of tumor mutational burden and disparate clinical outcomes in response to immune checkpoint inhibitors
AH Nassar, E Adib, S Abou Alaiwi, T El Zarif, S Groha, EW Akl, PV Nuzzo, ...
Cancer Cell 40 (10), 1161-1172. e5, 2022
Integrating precision cancer medicine into healthcare—policy, practice, and research challenges
G Bertier, J Carrot-Zhang, V Ragoussis, Y Joly
Genome medicine 8, 1-12, 2016
Molecular analyses reveal close similarities between small cell carcinoma of the ovary, hypercalcemic type and atypical teratoid/rhabdoid tumor
S Fahiminiya, L Witkowski, J Nadaf, J Carrot-Zhang, C Goudie, ...
Oncotarget 7 (2), 1732, 2016
Evolution of DNA methylome from precancerous lesions to invasive lung adenocarcinomas
X Hu, MR Estecio, R Chen, A Reuben, L Wang, J Fujimoto, ...
Nature communications 12 (1), 687, 2021
Ancestry-specific predisposing germline variants in cancer
N Oak, AD Cherniack, RJ Mashl, FR Hirsch, L Ding, R Beroukhim, ...
Genome medicine 12, 1-15, 2020
Gain-of-function mutation in TRPV4 identified in patients with osteonecrosis of the femoral head
W Mah, SK Sonkusare, T Wang, B Azeddine, M Pupavac, J Carrot-Zhang, ...
Journal of medical genetics 53 (10), 705-709, 2016
Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway
J Carrot-Zhang, X Yao, S Devarakonda, A Deshpande, JS Damrauer, ...
Cell reports 34 (5), 2021
Genetic ancestry correlates with somatic differences in a real-world clinical cancer sequencing cohort
K Arora, TN Tran, Y Kemel, M Mehine, YL Liu, S Nandakumar, SA Smith, ...
Cancer discovery 12 (11), 2552-2565, 2022
LoLoPicker: detecting low allelic-fraction variants from low-quality cancer samples
J Carrot-Zhang, J Majewski
Oncotarget 8 (23), 37032, 2017
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