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Adam Duster
Adam Duster
Verified email at ucdenver.edu
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Year
Adaptive quantum/molecular mechanics: What have we learned, where are we, and where do we go from here?
AW Duster, CH Wang, CM Garza, DE Miller, H Lin
Wiley Interdisciplinary Reviews: Computational Molecular Science 7 (5), e1310, 2017
772017
Adaptive Partitioning QM/MM for Molecular Dynamics Simulations: 6. Proton Transport through a Biological Channel
AW Duster, CM Garza, BO Aydintug, MB Negussie, H Lin
Journal of chemical theory and computation 15 (2), 892-905, 2019
312019
Adaptive QM/MM for molecular dynamics simulations: 5. On the energy-conserved permuted adaptive-partitioning schemes
A Duster, CH Wang, H Lin
Molecules 23 (9), 2170, 2018
282018
Tracking Proton Transfer through Titratable Amino Acid Side Chains in Adaptive QM/MM Simulations
AW Duster, H Lin
Journal of chemical theory and computation, 2019
222019
QMMM
H Lin, Y Zhang, S Pezeshki, A Duster, DG Truhlar
University of Minnesota, 2017
172017
Adaptive partitioning QM/MM dynamics simulations for substrate uptake, product release, and solvent exchange
A Duster, C Garza, H Lin
Methods in enzymology 577, 341-357, 2016
132016
Chloride ion transport by the E. coli CLC Cl−/H+ antiporter: A combined quantum-mechanical and molecular-mechanical study
CH Wang, AW Duster, BO Aydintug, MKG Zarecki, H Lin
Frontiers in chemistry 6, 62, 2018
122018
Restrained proton indicator in combined quantum-mechanics/molecular-mechanics dynamics simulations of proton transfer through a carbon nanotube
AW Duster, H Lin
The Journal of Physical Chemistry B 121 (36), 8585-8592, 2017
82017
Anion Pathways in CLCF Fluoride/Proton Antiporters
NL Chon, AW Duster, B Aydintug, H Lin
Chemical Physics Letters, 138123, 2020
62020
Cover Image, Volume 7, Issue 5
AW Duster, CH Wang, CM Garza, DE Miller, H Lin
Wiley Interdisciplinary Reviews: Computational Molecular Science 7 (5), e1339, 2017
12017
Membrane Transport: Riding elevators into and out of cells
AW Duster, H Lin
eLife 9, e62925, 2020
2020
Enabling Proton Transport Through Ion Channels with Adaptive QM/MM
AW Duster, H Lin
Biophysical Journal 118 (3), 609a, 2020
2020
Proton Transport in E. Coli CLC Transport Protein by Adaptive QM/MM Calculations
BO Aydintug, A Duster, C Garza, M Negussie, H Lin
Biophysical Journal 116 (3), 432a, 2019
2019
Tools and Methodology for the Adaptive Multiscale Simulation of Proton Transport in Complex Environments
AW Duster
University of Colorado at Denver, 2017
2017
Adaptive-partitioning QM/MM for dynamics simulations
A Duster, C Garza, MK Zarecki, H Lin
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 252, 2016
2016
Molecular dynamics of clusters formed from ammonia, sulfuric acid, and water
N Chon, A Duster, H Lin
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 250, 2015
2015
Simulations of Ion Solvation and Transfer by Adaptive-Partitioning QM/MM Dynamics
A Duster, H Lin
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Articles 1–17