Scott Rifkin
Scott Rifkin
Assistant Professor of Biology, UCSD
Verified email at ucsd.edu - Homepage
TitleCited byYear
Imaging individual mRNA molecules using multiple singly labeled probes
A Raj, P Van Den Bogaard, SA Rifkin, A Van Oudenaarden, S Tyagi
Nature methods 5 (10), 877, 2008
12912008
Variability in gene expression underlies incomplete penetrance
A Raj, SA Rifkin, E Andersen, A Van Oudenaarden
Nature 463 (7283), 913, 2010
5632010
Microarray analysis of Drosophila development during metamorphosis
KP White, SA Rifkin, P Hurban, DS Hogness
Science 286 (5447), 2179-2184, 1999
4981999
Revealing the architecture of gene regulation: the promise of eQTL studies
Y Gilad, SA Rifkin, JK Pritchard
Trends in genetics 24 (8), 408-415, 2008
4552008
Evolution of gene expression in the Drosophila melanogaster subgroup
SA Rifkin, J Kim, KP White
Nature genetics 33 (2), 138, 2003
3802003
A gene expression map for the euchromatic genome of Drosophila melanogaster
V Stolc, Z Gauhar, C Mason, G Halasz, MF Van Batenburg, SA Rifkin, ...
Science 306 (5696), 655-660, 2004
3472004
Genetic properties influencing the evolvability of gene expression
CR Landry, B Lemos, SA Rifkin, WJ Dickinson, DL Hartl
Science 317 (5834), 118-121, 2007
2722007
Multi-species microarrays reveal the effect of sequence divergence on gene expression profiles
Y Gilad, SA Rifkin, P Bertone, M Gerstein, KP White
Genome research 15 (5), 674-680, 2005
1892005
Natural selection on gene expression
Y Gilad, A Oshlack, SA Rifkin
TRENDS in Genetics 22 (8), 456-461, 2006
1882006
Duplicate genes increase gene expression diversity within and between species
Z Gu, SA Rifkin, KP White, WH Li
Nature genetics 36 (6), 577, 2004
1822004
A mutation accumulation assay reveals a broad capacity for rapid evolution of gene expression
SA Rifkin, D Houle, J Kim, KP White
Nature 438 (7065), 220, 2005
1762005
Ubiquitin-mediated response to microsporidia and virus infection in C. elegans
MA Bakowski, CA Desjardins, MG Smelkinson, TA Dunbar, ...
PLoS pathogens 10 (6), e1004200, 2014
942014
Geometry of gene expression dynamics
SA Rifkin, J Kim
Bioinformatics 18 (9), 1176-1183, 2002
302002
The yeast galactose network as a quantitative model for cellular memory
SR Stockwell, CR Landry, SA Rifkin
Molecular bioSystems 11 (1), 28-37, 2015
272015
MED GATA factors promote robust development of the C. elegans endoderm
MF Maduro, G Broitman-Maduro, H Choi, F Carranza, ACY Wu, SA Rifkin
Developmental biology 404 (1), 66-79, 2015
242015
Genome-wide fitness assessment during diurnal growth reveals an expanded role of the cyanobacterial circadian clock protein KaiA
DG Welkie, BE Rubin, YG Chang, S Diamond, SA Rifkin, A LiWang, ...
Proceedings of the National Academy of Sciences 115 (30), E7174-E7183, 2018
132018
The genotype–phenotype maps of systems biology and quantitative genetics: distinct and complementary
CR Landry, SA Rifkin
Evolutionary Systems Biology, 371-398, 2012
132012
Constraint structure analysis of gene expression
SA Rifkin, K Atteson, J Kim
Functional & integrative genomics 1 (3), 174-185, 2000
112000
Aro: a machine learning approach to identifying single molecules and estimating classification error in fluorescence microscopy images
ACY Wu, SA Rifkin
BMC bioinformatics 16 (1), 102, 2015
92015
Identifying fluorescently labeled single molecules in image stacks using machine learning
SA Rifkin
Molecular Methods for Evolutionary Genetics, 329-348, 2012
92012
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