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Zachary S.L. Foster
Zachary S.L. Foster
USDA ARS
Verified email at oregonstate.edu
Title
Cited by
Cited by
Year
Metacoder: An R package for visualization and manipulation of community taxonomic diversity data
ZSL Foster, TJ Sharpton, NJ Grünwald
PLoS computational biology 13 (2), e1005404, 2017
5722017
Building a model: developing genomic resources for common milkweed (Asclepias syriaca) with low coverage genome sequencing
SCK Straub, M Fishbein, T Livshultz, Z Foster, M Parks, K Weitemier, ...
BMC genomics 12, 1-22, 2011
1522011
taxize: Taxonomic information from around the web
S Chamberlain, E Szoecs, Z Foster, Z Arendsee, C Boettiger, K Ram, ...
R package version 0.9 92, 2020
1232020
Taxa: An R package implementing data standards and methods for taxonomic data
ZSL Foster, S Chamberlain, NJ Grünwald
F1000Research 7, 2018
342018
Soilborne Phytophthora and Pythium Diversity From Rhododendron in Propagation, Container, and Field Production Systems of the Pacific Northwest
JE Weiland, CF Scagel, NJ Grünwald, EA Davis, BR Beck, ZSL Foster, ...
Plant disease 104 (6), 1841-1850, 2020
202020
A New Oomycete Metabarcoding Method Using the rps10 Gene
ZSL Foster, FE Albornoz, VJ Fieland, MM Larsen, FA Jones, BM Tyler, ...
Phytobiomes Journal 6 (3), 214-226, 2022
172022
Genetic Differentiation and Clonal Expansion of Chinese Botrytis cinerea Populations from Tomato and Other Crops in China
Y Diao, MM Larsen, ZN Kamvar, C Zhang, S Li, W Wang, D Lin, Q Peng, ...
Phytopathology 110 (2), 428-439, 2020
142020
The Composition of the Fungal and Oomycete Microbiome of Rhododendron Roots Under Varying Growth Conditions, Nurseries, and Cultivars
ZSL Foster, JE Weiland, CF Scagel, NJ Grünwald
Phytobiomes journal 4 (2), 156-164, 2020
132020
Package ‘metacoder’
Z Foster, N Grunwald, R Gilmore
Tools for Parsing, 2024
22024
Openness and computational reproducibility in plant pathology: Where we stand and a way forward
AH Sparks, EMD Ponte, KS Alves, ZSL Foster, NJ Grünwald
Phytopathology® 113 (7), 1159-1170, 2023
22023
High-quality genome assemblies of Phytophthora ramorum clonal lineages NA1 and EU1 from PacBio sequencing
N Carleson, CM Press, Z Foster, N Grunwald
Phytopathology 111 (10), 58-58, 2021
12021
Metabarcoding for plant pathologists
MA Sudermann, ZSL Foster, JH Chang, NJ Grünwald
Canadian Journal of Plant Pathology, 1-19, 2023
2023
Genetic diversity, evolution, and diagnosis of sugarcane yellow leaf virus from 19 sugarcane-producing locations worldwide
P Rott, S Grinstead, S Dallot, ZSL Foster, JH Daugrois, E Fernandez, ...
Plant Disease 107 (11), 3437-3447, 2023
2023
Krisp: A python package for designing CRISPR and amplification-based diagnostic assays from whole genome data
ZSL Foster, AS Tupper, CM Press, NJ Grunwald
bioRxiv, 2023.11. 16.567433, 2023
2023
Impact of genetic diversity on diagnosis of sugarcane yellow leaf virus
P Rott, S Grinstead, S Dallot, ZSL Foster, JH Daugrois, E Fernandez, ...
SFV, 2023
2023
Development of the KRISP python tool and validation of a CRISPR Cas diagnostic assay for detection of Phytophthora ramorum
CM Press, Z Foster, N Carleson, N Grunwald
PHYTOPATHOLOGY 112 (11), 11-11, 2022
2022
Development of Computational, Visualization, and Molecular Tools for Fungal and Oomycete Community Ecology
ZSL Foster
2020
Next generation sequencing of oomycete communities in nursery irrigation water
J Eberhart, F Funahashi, ZSL Foster, J Parke
Proceedings of the sudden oak death sixth science symposium. Gen. Tech. Rep …, 2017
2017
Analysis of Microbiome Community Data in R
NJ Grünwald, ZSL Foster
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Articles 1–19