Marnix Medema

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Kai BlinSenior Researcher at the Novo Nordisk Foundation Center for BiosustainabilityAdresse e-mail validée de biosustain.dtu.dk
Eriko TakanoProfessor of Synthetic Biology, Manchester Institute of Biotechnology, University of ManchesterAdresse e-mail validée de manchester.ac.uk
Tilmann WeberProfessor / Associate Scientific Director @ DTU Biosustain, Technical University of DenmarkAdresse e-mail validée de biosustain.dtu.dk
Rainer BreitlingProfessor of Systems Biology, Manchester Institute of Biotechnology, University of ManchesterAdresse e-mail validée de manchester.ac.uk
Michael A FischbachStanford UniversityAdresse e-mail validée de fischbachgroup.org
Gilles van WezelLeiden University; NIOO-KNAWAdresse e-mail validée de biology.leidenuniv.nl
Satria A KautsarJoint Genome Institute / Berkeley LabAdresse e-mail validée de lbl.gov
Justin J.J. van der HooftAssistant Professor Computational Metabolomics @ WURAdresse e-mail validée de wur.nl
Sang Yup LeeKAISTAdresse e-mail validée de kaist.ac.kr
Jos M RaaijmakersKNAW, Leiden UniversityAdresse e-mail validée de nioo.knaw.nl
Peter CimermančičScientist, VerilyAdresse e-mail validée de ucsf.edu
Nadine ZiemertAssociate Professor at University of Tuebingen, GermanyAdresse e-mail validée de uni-tuebingen.de
Pieter C DorresteinUCSDAdresse e-mail validée de ucsd.edu
Mohammad Alanjarywageningen university and researchAdresse e-mail validée de wur.nl
Hernando SuarezWageningen UniversityAdresse e-mail validée de wur.nl
Vittorio TracannaPostdoc, Cologne UniversityAdresse e-mail validée de uni-koeln.de
Hyun Uk KimKAISTAdresse e-mail validée de kaist.ac.kr
Victor J CarrionRamón y Cajal researcher/Assistant ProfessorAdresse e-mail validée de biology.leidenuniv.nl
Daniel KrugHelmholtz Institute for Pharmaceutical Research SaarlandAdresse e-mail validée de helmholtz-hzi.de
Emzo de los SantosUCBAdresse e-mail validée de ucb.com

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Marnix Medema

Professor of Bioinformatics at Wageningen University

Adresse e-mail validée de wur.nl - Page d'accueil

Computational Biology Bioinformatics Natural Products Microbiomes Synthetic Biology


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline K Blin, S Shaw, K Steinke, R Villebro, N Ziemert, SY Lee, MH Medema, ... Nucleic acids research 47 (W1), W81-W87, 2019	2644	2019
antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters T Weber, K Blin, S Duddela, D Krug, HU Kim, R Bruccoleri, SY Lee, ... Nucleic acids research 43 (W1), W237-W243, 2015	2041	2015
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences MH Medema, K Blin, P Cimermancic, V de Jager, P Zakrzewski, ... Nucleic Acids Research 39 (suppl 2), W339, 2011	1983	2011
antiSMASH 6.0: improving cluster detection and comparison capabilities K Blin, S Shaw, AM Kloosterman, Z Charlop-Powers, GP Van Wezel, ... Nucleic acids research 49 (W1), W29-W35, 2021	1704	2021
Structure and function of the global topsoil microbiome M Bahram, F Hildebrand, SK Forslund, JL Anderson, NA Soudzilovskaia, ... Nature 560 (7717), 233-237, 2018	1579	2018
antiSMASH 4.0—improvements in chemistry prediction and gene cluster boundary identification K Blin, T Wolf, MG Chevrette, X Lu, CJ Schwalen, SA Kautsar, ... Nucleic acids research 45 (W1), W36-W41, 2017	1237	2017
antiSMASH 2.0—a versatile platform for genome mining of secondary metabolite producers K Blin, MH Medema, D Kazempour, MA Fischbach, R Breitling, E Takano, ... Nucleic acids research 41 (W1), W204-W212, 2013	955	2013
Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters P Cimermancic, MH Medema, J Claesen, K Kurita, LCW Brown, ... Cell 158 (2), 412-421, 2014	936	2014
Minimum information about a biosynthetic gene cluster MH Medema, R Kottmann, P Yilmaz, M Cummings, JB Biggins, K Blin, ... Nature chemical biology 11 (9), 625-631, 2015	839	2015
NRPSpredictor2—a web server for predicting NRPS adenylation domain specificity M Röttig, MH Medema, K Blin, T Weber, C Rausch, O Kohlbacher Nucleic Acids Research 39 (suppl 2), W362, 2011	699	2011
Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome VJ Carrión, J Perez-Jaramillo, V Cordovez, V Tracanna, M De Hollander, ... Science 366 (6465), 606-612, 2019	673	2019
A computational framework to explore large-scale biosynthetic diversity JC Navarro-Muñoz, N Selem-Mojica, MW Mullowney, SA Kautsar, ... Nature chemical biology 16 (1), 60-68, 2020	594*	2020
MIBiG 2.0: a repository for biosynthetic gene clusters of known function SA Kautsar, K Blin, S Shaw, JC Navarro-Muñoz, BR Terlouw, ... Nucleic acids research 48 (D1), D454-D458, 2020	565	2020
Towards the sustainable discovery and development of new antibiotics M Miethke, M Pieroni, T Weber, M Brönstrup, P Hammann, L Halby, ... Nature Reviews Chemistry 5 (10), 726-749, 2021	561	2021
Denitrifying bacteria anaerobically oxidize methane in the absence of Archaea KF Ettwig, S Shima, KT Van De Pas‐Schoonen, J Kahnt, MH Medema, ... Environmental microbiology 10 (11), 3164-3173, 2008	517	2008
Computational approaches to natural product discovery MH Medema, MA Fischbach Nature chemical biology 11 (9), 639-648, 2015	476	2015
Detecting sequence homology at the gene cluster level with MultiGeneBlast MH Medema, E Takano, R Breitling Molecular biology and evolution 30 (5), 1218-1223, 2013	359	2013
The natural products atlas: an open access knowledge base for microbial natural products discovery JA Van Santen, G Jacob, AL Singh, V Aniebok, MJ Balunas, D Bunsko, ... ACS central science 5 (11), 1824-1833, 2019	307	2019
MolNetEnhancer: Enhanced molecular networks by integrating metabolome mining and annotation tools M Ernst, KB Kang, AM Caraballo-Rodríguez, LF Nothias, J Wandy, ... Metabolites 9 (7), 144, 2019	304	2019
antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation K Blin, S Shaw, HE Augustijn, ZL Reitz, F Biermann, M Alanjary, A Fetter, ... Nucleic acids research 51 (W1), W46-W50, 2023	303	2023

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