Eric CH Chen
Eric CH Chen
BC Centre for Disease Control/University of British Columbia
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High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis
ECH Chen, E Morin, D Beaudet, J Noel, G Yildirir, S Ndikumana, ...
New Phytologist, 2018
Comparative genomics of Rhizophagus irregularis, R. cerebriforme, R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina
E Morin, S Miyauchi, H San Clemente, ECH Chen, A Pelin, ...
New Phytologist 222 (3), 1584-1598, 2019
Single nucleus sequencing reveals evidence of inter-nucleus recombination in arbuscular mycorrhizal fungi
ECH Chen, S Mathieu, A Hoffrichter, K Sedzielewska-Toro, M Peart, ...
eLife, e39813, 2018
Long reads and Hi‐C sequencing illuminate the two‐compartment genome of the model arbuscular mycorrhizal symbiont Rhizophagus irregularis
G Yildirir, J Sperschneider, M Malar C, ECH Chen, W Iwasaki, C Cornell, ...
New Phytologist 233 (3), 1097-1107, 2022
Ultra-low input transcriptomics reveal the spore functional content and phylogenetic affiliations of poorly studied arbuscular mycorrhizal fungi
D Beaudet, ECH Chen, S Mathieu, G Yildirir, S Ndikumana, Y Dalpe, ...
DNA Research 25 (2), 217-227, 2018
The genome of Geosiphon pyriformis reveals ancestral traits linked to the emergence of the arbuscular mycorrhizal symbiosis.
M Malar C, M Krüger, C Krüger, Y Wang, JE Stajich, J Keller, ECH Chen, ...
Current Biology 31 (Issue 7), 1570-1577.e4, 2021
An ethnobotany of the Lukomir highlanders of Bosnia & Herzegovina
J Ferrier, L Saciragic, S Trakić, ECH Chen, RL Gendron, A Cuerrier, ...
Journal of Ethnobiology and Ethnomedicine 11, 1-17, 2015
Ancient eudicot hexaploidy meets ancestral eurosid gene order
C Zheng, E Chen, VA Albert, E Lyons, D Sankoff
BMC genomics 14 (7), 1-13, 2013
The dynamics of functional classes of plant genes in rediploidized ancient polyploids
ECH Chen, CF Buen Abad Najar, C Zheng, A Brandts, E Lyons, H Tang, ...
BMC bioinformatics 14 (15), 1-10, 2013
Traditional medicines used by Q’eqchi’Maya to treat diabetic symptoms and their antiglycation potential
J Ferrier, A Saleem, AC Ramirez, R Liu, E Chen, T Pesek, V Cal, M Balick, ...
Journal of ethnopharmacology 224, 504-511, 2018
Ways the Lukomir Highlanders of Bosnia and Herzegovina Treat Diabetes
J Ferrier, L Šačiragić, ECH Chen, S Trakić, A Saleem, E Alikadić, ...
Ethnobotany and Biocultural Diversities in the Balkans, 13--27, 2014
More filtering on SNP calling does not remove evidence of inter-nucleus recombination in dikaryotic arbuscular mycorrhizal fungi
E Chen, S Mathieu, A Hoffrichter, J Ropars, S Dreissig, J Fuchs, ...
Frontiers in Plant Science, 2020
The Kernel of Maximum Agreement Subtrees
KM Swenson, E Chen, ND Pattengale, D Sankoff
IEEE/ACM transactions on computational biology and bioinformatics 9 (4 …, 2012
Arbuscular mycorrhizal fungi heterokaryons have two nuclear populations with distinct roles in host–plant interactions
J Sperschneider, G Yildirir, YS Rizzi, M Malar C, A Mayrand Nicol, ...
Nature Microbiology, 1-12, 2023
Resolving the haplotypes of arbuscular mycorrhizal fungi highlights the role of two nuclear populations in host interactions
J Sperschneider, G Yildirir, Y Rizzi, M Malar C, E Sorwar, ECH Chen, ...
bioRxiv, 2023.01. 15.524138, 2023
Gene expression and fractionation resistance
ECH Chen, D Sankoff
BMC genomics 15 (6), 1-9, 2014
Statistical analysis of fractionation resistance by functional category and expression
ECH Chen, A Morin, JH Chauchat, D Sankoff
BMC genomics 18, 1-9, 2017
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