Rebecca A. Daly
Rebecca A. Daly
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Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses
SJ Blazewicz, RL Barnard, RA Daly, MK Firestone
The ISME journal 7 (11), 2061-2068, 2013
Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients
MJ Cox, M Allgaier, B Taylor, MS Baek, YJ Huang, RA Daly, U Karaoz, ...
PloS one 5 (6), e11044, 2010
Microbial metabolisms in a 2.5-km-deep ecosystem created by hydraulic fracturing in shales
RA Daly, MA Borton, MJ Wilkins, DW Hoyt, DJ Kountz, RA Wolfe, ...
Nature Microbiology 1 (10), 1-9, 2016
Bacterial community structure corresponds to performance during cathodic nitrate reduction
KC Wrighton, B Virdis, P Clauwaert, ST Read, RA Daly, N Boon, Y Piceno, ...
The ISME journal 4 (11), 1443-1455, 2010
Minimum information about an uncultivated virus genome (MIUViG)
S Roux, EM Adriaenssens, BE Dutilh, EV Koonin, AM Kropinski, ...
Nature biotechnology 37 (1), 29-37, 2019
Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions
JC Angle, TH Morin, LM Solden, AB Narrowe, GJ Smith, MA Borton, ...
Nature communications 8 (1), 1-9, 2017
New roles in hemicellulosic sugar fermentation for the uncultivated Bacteroidetes family BS11
LM Solden, DW Hoyt, WB Collins, JE Plank, RA Daly, E Hildebrand, ...
The ISME journal 11 (3), 691-703, 2017
Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes
S Roux, M Krupovic, RA Daly, AL Borges, S Nayfach, F Schulz, A Sharrar, ...
Nature microbiology 4 (11), 1895-1906, 2019
Chemical and pathogen-induced inflammation disrupt the murine intestinal microbiome
MA Borton, A Sabag-Daigle, J Wu, LM Solden, BS O’Banion, RA Daly, ...
Microbiome 5 (1), 1-15, 2017
Interspecies cross-feeding orchestrates carbon degradation in the rumen ecosystem
LM Solden, AE Naas, S Roux, RA Daly, WB Collins, CD Nicora, ...
Nature microbiology 3 (11), 1274-1284, 2018
Effects of organic carbon supply rates on uranium mobility in a previously bioreduced contaminated sediment
J Wan, TK Tokunaga, Y Kim, E Brodie, R Daly, TC Hazen, MK Firestone
Environmental science & technology 42 (20), 7573-7579, 2008
Viruses control dominant bacteria colonizing the terrestrial deep biosphere after hydraulic fracturing
RA Daly, S Roux, MA Borton, DM Morgan, MD Johnston, AE Booker, ...
Nature microbiology 4 (2), 352-361, 2019
High‐resolution sequencing reveals unexplored archaeal diversity in freshwater wetland soils
AB Narrowe, JC Angle, RA Daly, KC Stefanik, KC Wrighton, CS Miller
Environmental microbiology 19 (6), 2192-2209, 2017
Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales
MA Borton, DW Hoyt, S Roux, RA Daly, SA Welch, CD Nicora, S Purvine, ...
Proceedings of the National Academy of Sciences 115 (28), E6585-E6594, 2018
Trends and future challenges in sampling the deep terrestrial biosphere
MJ Wilkins, R Daly, PJ Mouser, R Trexler, KC Wrighton, S Sharma, ...
Frontiers in microbiology 5, 481, 2014
Sulfide generation by dominant Halanaerobium microorganisms in hydraulically fractured shales
AE Booker, MA Borton, RA Daly, SA Welch, CD Nicora, DW Hoyt, ...
MSphere 2 (4), e00257-17, 2017
Influences of organic carbon supply rate on uranium bioreduction in initially oxidizing, contaminated sediment
TK Tokunaga, J Wan, Y Kim, RA Daly, EL Brodie, TC Hazen, D Herman, ...
Environmental science & technology 42 (23), 8901-8907, 2008
Sulfide generation by dominant Halanaerobium microorganisms in hydraulically fractured shales
AE Booker, MA Borton, RA Daly, SA Welch, CD Nicora, DW Hoyt, ...
mSphere 2 (4), e00257-17, 2017
Members of the genus Methylobacter are inferred to account for the majority of aerobic methane oxidation in oxic soils from a freshwater wetland
GJ Smith, JC Angle, LM Solden, MA Borton, TH Morin, RA Daly, ...
MBio 9 (6), 2018
DRAM for distilling microbial metabolism to automate the curation of microbiome function
M Shaffer, MA Borton, BB McGivern, AA Zayed, SL La Rosa, LM Solden, ...
Nucleic acids research 48 (16), 8883-8900, 2020
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