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David Osumi-Sutherland
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The gene ontology resource: 20 years and still GOing strong
Gene Ontology Consortium
Nucleic acids research 47 (D1), D330-D338, 2019
34552019
FlyBase: enhancing Drosophila Gene Ontology annotations
S Tweedie, M Ashburner, K Falls, P Leyland, P McQuilton, S Marygold, ...
Nucleic acids research 37 (suppl_1), D555-D559, 2009
8762009
Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources
S Köhler, L Carmody, N Vasilevsky, JOB Jacobsen, D Danis, JP Gourdine, ...
Nucleic acids research 47 (D1), D1018-D1027, 2019
6642019
SynGO: an evidence-based, expert-curated knowledge base for the synapse
F Koopmans, P van Nierop, M Andres-Alonso, A Byrnes, T Cijsouw, ...
Neuron 103 (2), 217-234. e4, 2019
5292019
TGF-β Family Signal Transduction in Drosophila Development: From Mad to Smads
LA Raftery, DJ Sutherland
Developmental biology 210 (2), 251-268, 1999
4611999
The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource
E Sollis, A Mosaku, A Abid, A Buniello, M Cerezo, L Gil, T Groza, O Güneş, ...
Nucleic acids research 51 (D1), D977-D985, 2023
3632023
Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly
H Li, J Janssens, M De Waegeneer, SS Kolluru, K Davie, V Gardeux, ...
Science 375 (6584), eabk2432, 2022
3362022
The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability
AD Diehl, TF Meehan, YM Bradford, MH Brush, WM Dahdul, DS Dougall, ...
Journal of biomedical semantics 7, 1-10, 2016
2302016
Finding our way through phenotypes
AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ...
PLoS biology 13 (1), e1002033, 2015
2292015
Medea is a Drosophila Smad4 homolog that is differentially required to potentiate DPP responses
RG Wisotzkey, A Mehra, DJ Sutherland, LL Dobens, X Liu, C Dohrmann, ...
Development 125 (8), 1433-1445, 1998
2151998
Expansion of the Gene Ontology knowledgebase and resources
S Carbon, H Dietze, SE Lewis, CJ Mungall, MC Munoz-Torres, S Basu, ...
Nucleic acids research 45 (D1), 2017
2102017
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species
KA Shefchek, NL Harris, M Gargano, N Matentzoglu, D Unni, M Brush, ...
Nucleic acids research 48 (D1), D704-D715, 2020
1962020
CARO–the common anatomy reference ontology
MA Haendel, F Neuhaus, D Osumi-Sutherland, PM Mabee, JLV Mejino Jr, ...
Anatomy ontologies for bioinformatics: principles and practice, 327-349, 2008
1272008
The Virtual Fly Brain browser and query interface
N Milyaev, D Osumi-Sutherland, S Reeve, N Burton, RA Baldock, ...
Bioinformatics 28 (3), 411-415, 2012
1262012
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies
R Jackson, N Matentzoglu, JA Overton, R Vita, JP Balhoff, PL Buttigieg, ...
Database 2021, baab069, 2021
1212021
Stepwise formation of a SMAD activity gradient during dorsal-ventral patterning of the Drosophila embryo
DJ Sutherland, M Li, X Liu, R Stefancsik, LA Raftery
Oxford University Press for The Company of Biologists Limited 130 (23), 5705 …, 2003
932003
Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems
PD Thomas, DP Hill, H Mi, D Osumi-Sutherland, K Van Auken, S Carbon, ...
Nature genetics 51 (10), 1429-1433, 2019
882019
The Drosophila anatomy ontology
M Costa, S Reeve, G Grumbling, D Osumi-Sutherland
Journal of biomedical semantics 4, 1-11, 2013
862013
Anatomical structures, cell types and biomarkers of the Human Reference Atlas
K Börner, SA Teichmann, EM Quardokus, JC Gee, K Browne, ...
Nature cell biology 23 (11), 1117-1128, 2021
822021
Expression Atlas update: gene and protein expression in multiple species
P Moreno, S Fexova, N George, JR Manning, Z Miao, S Mohammed, ...
Nucleic acids research 50 (D1), D129-D140, 2022
752022
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