Alexander Herbig
Alexander Herbig
Group Leader, Computational Pathogenomics, Department of Archaeogenetics, Max Planck Institute for the Science of Human History, Jena, Germany
Verified email at shh.mpg.de
Title
Cited by
Cited by
Year
Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis
KI Bos, KM Harkins, A Herbig, M Coscolla, N Weber, I Comas, SA Forrest, ...
Nature 514 (7523), 494-497, 2014
4862014
Genome-wide comparison of medieval and modern Mycobacterium leprae
VJ Schuenemann, P Singh, TA Mendum, B Krause-Kyora, G Jäger, KI Bos, ...
Science 341 (6142), 179-183, 2013
3092013
High-Resolution Transcriptome Maps Reveal Strain-Specific Regulatory Features of Multiple Campylobacter jejuni Isolates
G Dugar, A Herbig, KU Förstner, N Heidrich, R Reinhardt, K Nieselt, ...
PLoS genetics 9 (5), e1003495, 2013
2762013
Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli
MK Thomason, T Bischler, SK Eisenbart, KU Förstner, A Zhang, A Herbig, ...
Journal of bacteriology 197 (1), 18-28, 2015
2422015
EAGER: efficient ancient genome reconstruction
A Peltzer, G Jäger, A Herbig, A Seitz, C Kniep, J Krause, K Nieselt
Genome biology 17 (1), 1-14, 2016
2312016
The 5300-year-old Helicobacter pylori genome of the Iceman
F Maixner, B Krause-Kyora, D Turaev, A Herbig, MR Hoopmann, ...
Science 351 (6269), 162-165, 2016
1922016
The dynamic architecture of the metabolic switch in Streptomyces coelicolor
K Nieselt, F Battke, A Herbig, P Bruheim, A Wentzel, ØM Jakobsen, ...
BMC genomics 11 (1), 1-9, 2010
1752010
Salmonella enterica genomes from victims of a major sixteenth-century epidemic in Mexico
ÅJ Vågene, A Herbig, MG Campana, NMR García, C Warinner, S Sabin, ...
Nature ecology & evolution 2 (3), 520-528, 2018
1632018
Historical Y. pestis genomes reveal the European Black Death as the source of ancient and modern plague pandemics
MA Spyrou, RI Tukhbatova, M Feldman, J Drath, S Kacki, JB de Heredia, ...
Cell Host & Microbe 19 (6), 874-881, 2016
1632016
Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus
KI Bos, A Herbig, J Sahl, N Waglechner, M Fourment, SA Forrest, J Klunk, ...
Elife 5, e12994, 2016
1412016
Insight into the evolution and origin of leprosy bacilli from the genome sequence of Mycobacterium lepromatosis
P Singh, A Benjak, VJ Schuenemann, A Herbig, C Avanzi, P Busso, ...
Proceedings of the National Academy of Sciences 112 (14), 4459-4464, 2015
1272015
A High-Coverage Yersinia pestis Genome from a Sixth-Century Justinianic Plague Victim
M Feldman, M Harbeck, M Keller, MA Spyrou, A Rott, B Trautmann, ...
Molecular Biology and Evolution 33 (11), 2911-2923, 2016
1172016
A robust framework for microbial archaeology
C Warinner, A Herbig, A Mann, JA Fellows Yates, CL Weiß, HA Burbano, ...
Annual review of genomics and human genetics 18, 321-356, 2017
1072017
The Stone Age plague and its persistence in Eurasia
AA Valtueña, A Mittnik, FM Key, W Haak, R Allmäe, A Belinskij, ...
Current biology 27 (23), 3683-3691. e8, 2017
1042017
Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague
MA Spyrou, RI Tukhbatova, CC Wang, AA Valtueña, AK Lankapalli, ...
Nature Communications 9 (1), 1-10, 2018
1002018
Origin of modern syphilis and emergence of a pandemic Treponema pallidum cluster
N Arora, VJ Schuenemann, G Jäger, A Peltzer, A Seitz, A Herbig, ...
Nature microbiology 2 (1), 1-6, 2016
992016
Mining metagenomic data sets for ancient DNA: recommended protocols for authentication
FM Key, C Posth, J Krause, A Herbig, KI Bos
Trends in Genetics 33 (8), 508-520, 2017
872017
Ancient pathogen genomics as an emerging tool for infectious disease research
MA Spyrou, KI Bos, A Herbig, J Krause
Nature Reviews Genetics 20 (6), 323-340, 2019
802019
MALT: Fast alignment and analysis of metagenomic DNA sequence data applied to the Tyrolean Iceman
A Herbig, F Maixner, KI Bos, A Zink, J Krause, DH Huson
Cold Spring Harbor Laboratory, 2017
792017
Ancient genomes reveal a high diversity of Mycobacterium leprae in medieval Europe
VJ Schuenemann, C Avanzi, B Krause-Kyora, A Seitz, A Herbig, S Inskip, ...
PLoS pathogens 14 (5), e1006997, 2018
782018
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