Roland Arnold
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MIPS: analysis and annotation of proteins from whole genomes
HW Mewes, C Amid, R Arnold, D Frishman, U Güldener, G Mannhaupt, ...
Nucleic acids research 32 (suppl_1), D41-D44, 2004
Gepard: a rapid and sensitive tool for creating dotplots on genome scale
J Krumsiek, R Arnold, T Rattei
Bioinformatics 23 (8), 1026-1028, 2007
eggNOG v3. 0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges
S Powell, D Szklarczyk, K Trachana, A Roth, M Kuhn, J Muller, R Arnold, ...
Nucleic acids research 40 (D1), D284-D289, 2012
Sequence-based prediction of type III secreted proteins
R Arnold, S Brandmaier, F Kleine, P Tischler, E Heinz, S Behrens, ...
PLoS Pathog 5 (4), e1000376, 2009
Combined hereditary and somatic mutations of replication error repair genes result in rapid onset of ultra-hypermutated cancers
A Shlien, BB Campbell, R De Borja, LB Alexandrov, D Merico, D Wedge, ...
Nature genetics 47 (3), 257-262, 2015
MIPS Arabidopsis thaliana Database (MAtDB): an integrated biological knowledge resource based on the first complete plant genome
H Schoof, P Zaccaria, H Gundlach, K Lemcke, S Rudd, G Kolesov, ...
Nucleic Acids Research 30 (1), 91-93, 2002
probeCheck–a central resource for evaluating oligonucleotide probe coverage and specificity
A Loy, R Arnold, P Tischler, T Rattei, M Wagner, M Horn
Environmental Microbiology 10 (10), 2894-2898, 2008
The binary protein-protein interaction landscape of Escherichia coli
SV Rajagopala, P Sikorski, A Kumar, R Mosca, J Vlasblom, R Arnold, ...
Nature biotechnology 32 (3), 285-290, 2014
B2G-FAR, a species-centered GO annotation repository
S Götz, R Arnold, P Sebastián-León, S Martín-Rodríguez, P Tischler, ...
Bioinformatics 27 (7), 919-924, 2011
The genome of the amoeba symbiont “Candidatus Amoebophilus asiaticus” reveals common mechanisms for host cell interaction among amoeba-associated bacteria
S Schmitz-Esser, P Tischler, R Arnold, J Montanaro, M Wagner, T Rattei, ...
Journal of bacteriology 192 (4), 1045-1057, 2010
PEDANT covers all complete RefSeq genomes
MC Walter, T Rattei, R Arnold, U Güldener, M Münsterkötter, K Nenova, ...
Nucleic acids research 37 (suppl_1), D408-D411, 2009
Effective—a database of predicted secreted bacterial proteins
MA Jehl, R Arnold, T Rattei
Nucleic acids research 39 (suppl_1), D591-D595, 2010
Genetic interaction maps in Escherichia coli reveal functional crosstalk among cell envelope biogenesis pathways
M Babu, JJ Díaz-Mejía, J Vlasblom, A Gagarinova, S Phanse, C Graham, ...
PLoS Genet 7 (11), e1002377, 2011
Quantitative genome-wide genetic interaction screens reveal global epistatic relationships of protein complexes in Escherichia coli
M Babu, R Arnold, C Bundalovic-Torma, A Gagarinova, KS Wong, ...
PLoS Genet 10 (2), e1004120, 2014
A negative genetic interaction map in isogenic cancer cell lines reveals cancer cell vulnerabilities
FJ Vizeacoumar, R Arnold, FS Vizeacoumar, M Chandrashekhar, ...
Molecular systems biology 9 (1), 696, 2013
Large-scale interaction profiling of PDZ domains through proteomic peptide-phage display using human and viral phage peptidomes
Y Ivarsson, R Arnold, M McLaughlin, S Nim, R Joshi, D Ray, B Liu, J Teyra, ...
Proceedings of the National Academy of Sciences 111 (7), 2542-2547, 2014
Molecular recognition determinants for type IV secretion of diverse families of conjugative relaxases
S Lang, K Gruber, S Mihajlovic, R Arnold, CJ Gruber, S Steinlechner, ...
Molecular microbiology 78 (6), 1539-1555, 2010
SIMAP: the similarity matrix of proteins
T Rattei, R Arnold, P Tischler, D Lindner, V Stümpflen, HW Mewes
Nucleic acids research 34 (suppl_1), D252-D256, 2006
EffectiveDB—updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems
V Eichinger, T Nussbaumer, A Platzer, MA Jehl, R Arnold, T Rattei
Nucleic acids research 44 (D1), D669-D674, 2016
SIMAP—a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters
T Rattei, P Tischler, S Götz, MA Jehl, J Hoser, R Arnold, A Conesa, ...
Nucleic acids research 38 (suppl_1), D223-D226, 2010
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Articles 1–20