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Hosna Jabbari
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Year
An O (n 5) algorithm for MFE prediction of kissing hairpins and 4-chains in nucleic acids
HL Chen, A Condon, H Jabbari
Journal of Computational Biology 16 (6), 803-815, 2009
472009
A fast and robust iterative algorithm for prediction of RNA pseudoknotted secondary structures
H Jabbari, A Condon
BMC bioinformatics 15 (1), 1-17, 2014
342014
Novel and efficient RNA secondary structure prediction using hierarchical folding
H Jabbari, A Condon, S Zhao
Journal of Computational Biology 15 (2), 139-163, 2008
302008
Computational approaches to nucleic acid origami
H Jabbari, M Aminpour, C Montemagno
ACS combinatorial science 17 (10), 535-547, 2015
272015
Knotty: efficient and accurate prediction of complex RNA pseudoknot structures
H Jabbari, I Wark, C Montemagno, S Will
Bioinformatics 34 (22), 3849-3856, 2018
222018
HFold: RNA pseudoknotted secondary structure prediction using hierarchical folding
H Jabbari, A Condon, A Pop, C Pop, Y Zhao
International Workshop on Algorithms in Bioinformatics, 323-334, 2007
192007
RNA secondary structure prediction with pseudoknots: Contribution of algorithm versus energy model
H Jabbari, I Wark, C Montemagno
Plos one 13 (4), e0194583, 2018
122018
Computational prediction of nucleic acid secondary structure: Methods, applications, and challenges
A Condon, H Jabbari
Theoretical Computer Science 410 (4-5), 294-301, 2009
122009
Sparse RNA folding revisited: space-efficient minimum free energy structure prediction
S Will, H Jabbari
Algorithms for Molecular Biology 11 (1), 1-13, 2016
112016
Regulation of von Willebrand factor gene in endothelial cells that are programmed to pluripotency and differentiated back to endothelial cells
M Nakhaei-Nejad, M Farhan, A Mojiri, H Jabbari, AG Murray, N Jahroudi
Stem Cells 37 (4), 542-554, 2019
82019
A new class of cellular automata
H Jabbari, JC Muzio, L Sun
10th Euromicro Conference on Digital System Design Architectures, Methods …, 2007
82007
SARS-CoV-2 Ribosomal Frameshifting Pseudoknot: Detection of Inter-viral Structural Similarity
L Trinity, L Lansing, H Jabbari, U Stege
2021 IEEE 9th International Conference on Healthcare Informatics (ICHI), 451-460, 2021
4*2021
Algorithms for prediction of RNA pseudoknotted secondary structures
H Jabbari
University of British Columbia, 2015
32015
Improved Built-In Self-Test of Sequential Circuits
H Jabbari, JC Muzio, L Sun
2007 Canadian Conference on Electrical and Computer Engineering, 78-81, 2007
12007
Supervised promoter recognition: a benchmark framework
RI Perez Martell, A Ziesel, H Jabbari, U Stege
BMC bioinformatics 23 (1), 1-28, 2022
2022
KnotAli: informed energy minimization through the use of evolutionary information
M Gray, S Chester, H Jabbari
BMC bioinformatics 23 (1), 1-28, 2022
2022
AI-powered aptamer generation
M Khabbazian, H Jabbari
Nature Computational Science, 1-2, 2022
2022
Shapify: Pathways to SARS-CoV-2 Frameshifting Pseudoknot
L Trinity, I Wark, L Lansing, H Jabbari, U Stege
2022
Viz23: web server for visualization of gene expression and locational information
L Trinity, A Hollar, H Greenyer, H Jabbari, U Stege
Proceedings of the 31st Annual International Conference on Computer Science …, 2021
2021
Identification of conserved and evolving RNA secondary structures in SARS-CoV-2 and related viruses
A Ziesel, H Jabbari
Proceedings of the 31st Annual International Conference on Computer Science …, 2021
2021
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Articles 1–20