Maxime Déraspe
Maxime Déraspe
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The initial state of the human gut microbiome determines its reshaping by antibiotics
F Raymond, AA Ouameur, M Déraspe, N Iqbal, H Gingras, B Dridi, ...
The ISME journal 10 (3), 707-720, 2016
The resistome of Pseudomonas aeruginosa in relationship to phenotypic susceptibility
VN Kos, M Déraspe, RE McLaughlin, JD Whiteaker, PH Roy, RA Alm, ...
Antimicrobial agents and chemotherapy 59 (1), 427-436, 2015
Predictive computational phenotyping and biomarker discovery using reference-free genome comparisons
A Drouin, S Gigučre, M Déraspe, M Marchand, M Tyers, VG Loo, ...
BMC genomics 17, 1-15, 2016
Complete sequence of pOZ176, a 500-kilobase IncP-2 plasmid encoding IMP-9-mediated carbapenem resistance, from outbreak isolate Pseudomonas aeruginosa 96
J Xiong, DC Alexander, JH Ma, M Déraspe, DE Low, FB Jamieson, ...
Antimicrobial agents and chemotherapy 57 (8), 3775-3782, 2013
Partial recovery of microbiomes after antibiotic treatment
F Raymond, M Déraspe, M Boissinot, MG Bergeron, J Corbeil
Gut Microbes 7 (5), 428-434, 2016
Culture-enriched human gut microbiomes reveal core and accessory resistance genes
F Raymond, M Boissinot, AA Ouameur, M Déraspe, PL Plante, ...
Microbiome 7, 1-13, 2019
Machine learning analysis identifies genes differentiating triple negative breast cancers
C Kothari, MA Osseni, L Agbo, G Ouellette, M Déraspe, F Laviolette, ...
Scientific reports 10 (1), 10464, 2020
Phenetic comparison of prokaryotic genomes using k-mers
M Déraspe, F Raymond, S Boisvert, A Culley, PH Roy, F Laviolette, ...
Molecular biology and evolution 34 (10), 2716-2729, 2017
Genome and Plasmid Analysis of blaIMP-4-Carrying Citrobacter freundii B38
J Xiong, M Déraspe, N Iqbal, J Ma, FB Jamieson, J Wasserscheid, ...
Antimicrobial agents and chemotherapy 60 (11), 6719-6725, 2016
Complete genome of a panresistant Pseudomonas aeruginosa strain, isolated from a patient with respiratory failure in a Canadian community hospital
J Xiong, M Déraspe, N Iqbal, S Krajden, W Chapman, K Dewar, PH Roy
Genome announcements 5 (22), 10.1128/genomea. 00458-17, 2017
A blaVIM-2 Plasmid Disseminating in Extensively Drug-Resistant Clinical Pseudomonas aeruginosa and Serratia marcescens Isolates
E Vilacoba, C Quiroga, M Pistorio, A Famiglietti, H Rodríguez, J Kovensky, ...
Antimicrobial agents and chemotherapy 58 (11), 7017-7018, 2014
Genomic analysis of Pseudomonas aeruginosa PA96, the host of carbapenem resistance plasmid pOZ176
M Déraspe, DC Alexander, J Xiong, JH Ma, DE Low, FB Jamieson, ...
FEMS Microbiology Letters 356 (2), 212-216, 2014
Learning interpretable models of phenotypes from whole genome sequences with the Set Covering Machine
A Drouin, S Giguere, V Sagatovich, M Déraspe, F Laviolette, M Marchand, ...
arXiv preprint arXiv:1412.1074, 2014
Genomic diversity and CRISPR‐Cas systems in the cyanobacterium Nostoc in the High Arctic
AD Jungblut, F Raymond, MB Dion, S Moineau, V Mohit, GQ Nguyen, ...
Environmental Microbiology 23 (6), 2955-2968, 2021
Draft genome sequence of an international clonal lineage 1 Acinetobacter baumannii strain from Argentina
E Vilacoba, M Déraspe, GM Traglia, PH Roy, MS Ramírez, D Centrón
Genome announcements 2 (6), 10.1128/genomea. 01190-14, 2014
Flexible protein database based on amino acid k-mers
M Déraspe, S Boisvert, F Laviolette, PH Roy, J Corbeil
Scientific Reports 12 (1), 9101, 2022
Complete Genome Sequences of Klebsiella michiganensis and Citrobacter farmeri, KPC-2-Producers Serially Isolated from a Single Patient
JY Abed, M Déraspe, Č Bérubé, M D’Iorio, K Dewar, M Boissinot, ...
Antibiotics 10 (11), 1408, 2021
Serratia marcescens SCH909 as reservoir and source of genetic elements related to wide dissemination of antimicrobial resistance mechanisms
AS Gambino, M Déraspe, VE Álvarez, MP Quiroga, J Corbeil, PH Roy, ...
FEMS Microbiology Letters 368 (14), fnab086, 2021
Fast protein database as a service with kAAmer
M Déraspe, S Boisvert, F Laviolette, PH Roy, J Corbeil
bioRxiv, 2020.04. 01.019984, 2020
Genome sequence of a Klebsiella pneumoniae NDM-1 producer isolated in Quebec city
M Déraspe, J Longtin, PH Roy
Microbiology Resource Announcements 9 (3), 10.1128/mra. 00829-19, 2020
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