Flexible protein database based on amino acid k-mers M Déraspe, S Boisvert, F Laviolette, PH Roy, J Corbeil Scientific Reports 12 (1), 9101, 2022 | 5 | 2022 |
Complete Genome Sequences of Klebsiella michiganensis and Citrobacter farmeri, KPC-2-Producers Serially Isolated from a Single Patient JY Abed, M Déraspe, È Bérubé, M D’Iorio, K Dewar, M Boissinot, ... Antibiotics 10 (11), 1408, 2021 | 5 | 2021 |
Serratia marcescens SCH909 as reservoir and source of genetic elements related to wide dissemination of antimicrobial resistance mechanisms AS Gambino, M Déraspe, VE Álvarez, MP Quiroga, J Corbeil, PH Roy, ... FEMS Microbiology Letters 368 (14), fnab086, 2021 | 2 | 2021 |
Genomic diversity and CRISPR‐Cas systems in the cyanobacterium Nostoc in the High Arctic AD Jungblut, F Raymond, MB Dion, S Moineau, V Mohit, GQ Nguyen, ... Environmental Microbiology 23 (6), 2955-2968, 2021 | 10 | 2021 |
Complete Genome Sequences of Klebsiella michiganensis and Citrobacter farmeri, KPC-2-Producers Serially Isolated from a Single Patient. Antibiotics 2021, 10, 1408 JY Abed, M Déraspe, È Bérubé, M D’Iorio, K Dewar, M Boissinot, ... Carbapenemase-Producing Enterobacterales, 101, 2021 | | 2021 |
Génomique et métagénomique comparatives des bactéries M Déraspe Université Laval, 2021 | | 2021 |
Cross-study analyses of gut microbiomes from healthy and obese individuals M Deraspe, C Burdet, JM Dominguez, F Laviolette, PH Roy, J Corbeil | | 2020 |
Machine learning analysis identifies genes differentiating triple negative breast cancers C Kothari, MA Osseni, L Agbo, G Ouellette, M Déraspe, F Laviolette, ... Scientific reports 10 (1), 10464, 2020 | 35 | 2020 |
Fast protein database as a service with kAAmer M Déraspe, S Boisvert, F Laviolette, PH Roy, J Corbeil bioRxiv, 2020.04. 01.019984, 2020 | 3 | 2020 |
Genome sequence of a Klebsiella pneumoniae NDM-1 producer isolated in Quebec city M Déraspe, J Longtin, PH Roy Microbiology Resource Announcements 9 (3), 10.1128/mra. 00829-19, 2020 | 3 | 2020 |
Genome sequence of a Klebsiella pneumoniae NDM-1 producer isolated in Quebec City. Microbiol Resour Announc 9: e00829-19 M Déraspe, J Longtin, PH Roy | | 2020 |
Culture-enriched human gut microbiomes reveal core and accessory resistance genes F Raymond, M Boissinot, AA Ouameur, M Déraspe, PL Plante, ... Microbiome 7, 1-13, 2019 | 39 | 2019 |
Phenetic comparison of prokaryotic genomes using k-mers M Déraspe, F Raymond, S Boisvert, A Culley, PH Roy, F Laviolette, ... Molecular biology and evolution 34 (10), 2716-2729, 2017 | 29 | 2017 |
Complete genome of a panresistant Pseudomonas aeruginosa strain, isolated from a patient with respiratory failure in a Canadian community hospital J Xiong, M Déraspe, N Iqbal, S Krajden, W Chapman, K Dewar, PH Roy Genome announcements 5 (22), 10.1128/genomea. 00458-17, 2017 | 22 | 2017 |
Predictive computational phenotyping and biomarker discovery using reference-free genome comparisons A Drouin, S Giguère, M Déraspe, M Marchand, M Tyers, VG Loo, ... BMC genomics 17, 1-15, 2016 | 133 | 2016 |
Genome and Plasmid Analysis of blaIMP-4-Carrying Citrobacter freundii B38 J Xiong, M Déraspe, N Iqbal, J Ma, FB Jamieson, J Wasserscheid, ... Antimicrobial agents and chemotherapy 60 (11), 6719-6725, 2016 | 23 | 2016 |
Partial recovery of microbiomes after antibiotic treatment F Raymond, M Déraspe, M Boissinot, MG Bergeron, J Corbeil Gut Microbes 7 (5), 428-434, 2016 | 58 | 2016 |
Set Covering Machines and Reference-Free Genome Comparisons Uncover Predictive Biomarkers of Antibiotic Resistance A Drouin, S Giguère, M Déraspe, M Marchand, J Corbeil, F Laviolette | | 2016 |
The initial state of the human gut microbiome determines its reshaping by antibiotics F Raymond, AA Ouameur, M Déraspe, N Iqbal, H Gingras, B Dridi, ... The ISME journal 10 (3), 707-720, 2016 | 345 | 2016 |
Genome and plasmid analysis of blaIMP-4-carrying Citrobacter freundii B38. XJH Xiong JianHui, M Déraspe, N Iqbal, J Ma, FB Jamieson, ... | | 2016 |