Zhenyu Xuan
Zhenyu Xuan
Verified email at utdallas.edu
Title
Cited by
Cited by
Year
Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317-330, 2015
35152015
A microRNA component of the p53 tumour suppressor network
L He, X He, LP Lim, E De Stanchina, Z Xuan, Y Liang, W Xue, L Zender, ...
Nature 447 (7148), 1130-1134, 2007
29242007
The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis
MA Carmell, Z Xuan, MQ Zhang, GJ Hannon
Genes & development 16 (21), 2733-2742, 2002
10862002
Genome-wide in situ exon capture for selective resequencing
E Hodges, Z Xuan, V Balija, M Kramer, MN Molla, SW Smith, CM Middle, ...
Nature genetics 39 (12), 1522-1527, 2007
7622007
A long nuclear‐retained non‐coding RNA regulates synaptogenesis by modulating gene expression
D Bernard, KV Prasanth, V Tripathi, S Colasse, T Nakamura, Z Xuan, ...
The EMBO journal 29 (18), 3082-3093, 2010
6182010
Sensitive and accurate detection of copy number variants using read depth of coverage
S Yoon, Z Xuan, V Makarov, K Ye, J Sebat
Genome research 19 (9), 1586-1592, 2009
6042009
Regulating gene expression through RNA nuclear retention
KV Prasanth, SG Prasanth, Z Xuan, S Hearn, SM Freier, CF Bennett, ...
Cell 123 (2), 249-263, 2005
6042005
Epigenomic analysis of multilineage differentiation of human embryonic stem cells
W Xie, MD Schultz, R Lister, Z Hou, N Rajagopal, P Ray, JW Whitaker, ...
Cell 153 (5), 1134-1148, 2013
5652013
Critical roles for Dicer in the female germline
EP Murchison, P Stein, Z Xuan, H Pan, MQ Zhang, RM Schultz, ...
Genes & development 21 (6), 682-693, 2007
5402007
A biochemical approach to identifying microRNA targets
FV Karginov, C Conaco, Z Xuan, BH Schmidt, JS Parker, G Mandel, ...
Proceedings of the National Academy of Sciences 104 (49), 19291-19296, 2007
4382007
Deregulation of scribble promotes mammary tumorigenesis and reveals a role for cell polarity in carcinoma
L Zhan, A Rosenberg, KC Bergami, M Yu, Z Xuan, AB Jaffe, C Allred, ...
Cell 135 (5), 865-878, 2008
4322008
Using quality scores and longer reads improves accuracy of Solexa read mapping
AD Smith, Z Xuan, MQ Zhang
BMC bioinformatics 9 (1), 1-8, 2008
4082008
TRED: a transcriptional regulatory element database, new entries and other development
C Jiang, Z Xuan, F Zhao, MQ Zhang
Nucleic acids research 35 (suppl_1), D137-D140, 2007
3242007
Targeted investigation of the Neandertal genome by array-based sequence capture
HA Burbano, E Hodges, RE Green, AW Briggs, J Krause, M Meyer, ...
science 328 (5979), 723-725, 2010
3222010
A complete sequence of the T. tengcongensis genome
Q Bao, Y Tian, W Li, Z Xu, Z Xuan, S Hu, W Dong, J Yang, Y Chen, Y Xue, ...
Genome research 12 (5), 689-700, 2002
2662002
High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing
E Hodges, AD Smith, J Kendall, Z Xuan, K Ravi, M Rooks, MQ Zhang, ...
Genome research 19 (9), 1593-1605, 2009
2412009
TRED: a Transcriptional Regulatory Element Database and a platform for in silico gene regulation studies
F Zhao, Z Xuan, L Liu, MQ Zhang
Nucleic acids research 33 (suppl_1), D103-D107, 2005
2272005
Functional identification of tumor-suppressor genes through an in vivo RNA interference screen in a mouse lymphoma model
A Bric, C Miething, CU Bialucha, C Scuoppo, L Zender, A Krasnitz, Z Xuan, ...
Cancer cell 16 (4), 324-335, 2009
1902009
Updates to the RMAP short-read mapping software
AD Smith, WY Chung, E Hodges, J Kendall, G Hannon, J Hicks, Z Xuan, ...
Bioinformatics 25 (21), 2841-2842, 2009
1882009
Hybrid selection of discrete genomic intervals on custom-designed microarrays for massively parallel sequencing
E Hodges, M Rooks, Z Xuan, A Bhattacharjee, DB Gordon, L Brizuela, ...
Nature protocols 4 (6), 960, 2009
1832009
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Articles 1–20