Hammad Naveed
TitleCited byYear
Lipid-binding surfaces of membrane proteins: evidence from evolutionary and structural analysis
L Adamian, H Naveed, J Liang
Biochimica et Biophysica Acta (BBA)-Biomembranes 1808 (4), 1092-1102, 2011
722011
Predicting weakly stable regions, oligomerization state, and protein–protein interfaces in transmembrane domains of outer membrane proteins
H Naveed, R Jackups, J Liang
Proceedings of the National Academy of Sciences 106 (31), 12735-12740, 2009
642009
Structure-based Analysis of VDAC1 Protein
S Geula, H Naveed, J Liang, V Shoshan-Barmatz
Journal of Biological Chemistry 287 (3), 2179-2190, 2012
582012
Computational Studies of Membrane Proteins: Models and Predictions for Biological Understanding
J Liang, H Naveed, D Jimenez-Morales, L Adamian, M Lin
Biochimica et Biophysica Acta (BBA)-Biomembranes, 2012
432012
CoCiter: An Efficient Tool to Infer Gene Function by Assessing the Significance of Literature Co-Citation
N Qiao, Y Huang, H Naveed, CD Green, JDJ Han
PLoS ONE 8 (9), e74074, 2013
342013
Predicting three-dimensional structures of transmembrane domains of β-barrel membrane proteins
H Naveed, Y Xu, R Jackups Jr, J Liang
Journal of the American Chemical Society 134 (3), 1775-1781, 2012
342012
Mechanisms of Regulating Cell Topology in Proliferating Epithelia: Impact of Division Plane, Mechanical Forces, and Cell Memory
Y Li, H Naveed, S Kachalo, LX Xu, J Liang
PLoS ONE 7 (8), e43108, 2012
282012
Engineered oligomerization state of OmpF protein through computational design decouples oligomer dissociation from unfolding.
H Naveed, D Jimenez-Morales, J Tian, V Pasupuleti, LJ Kenney, J Liang
Journal of molecular biology, 2012
262012
ModuleAlign: module-based global alignment of protein–protein interaction networks
S Hashemifar, J Ma, H Naveed, S Canzar, J Xu
Bioinformatics 32 (17), i658-i664, 2016
212016
Outer membrane protein folding and topology from a computational transfer free energy scale
M Lin, D Gessmann, H Naveed, J Liang
Journal of the American Chemical Society 138 (8), 2592-2601, 2016
192016
Improving the resistance of a eukaryotic β-barrel protein to thermal and chemical perturbations
D Gessmann, F Mager, H Naveed, T Arnold, S Weirich, D Linke, J Liang, ...
Journal of molecular biology 413 (1), 150-161, 2011
162011
Mechanisms of Regulating Tissue Elongation in Drosophila Wing: Impact of Oriented Cell Divisions, Oriented Mechanical Forces, and Reduced Cell Size
Y Li, H Naveed, S Kachalo, LX Xu, J Liang
PLoS ONE, 2014
142014
Geometric order in proliferating epithelia: impact of rearrangements and cleavage plane orientation
H Naveed, Y Li, S Kachalo, J Liang
2010 Annual International Conference of the IEEE Engineering in Medicine and …, 2010
132010
Finding optimal interaction interface alignments between biological complexes
X Cui, H Naveed, X Gao
Bioinformatics 31 (12), i133-i141, 2015
112015
Modeling spatial population dynamics of stem cell lineage in tissue growth
Y Cao, C Liang, H Naveed, Y Li, M Chen, Q Nie
Engineering in Medicine and Biology Society, EMBC, 2012 Annual International …, 2012
102012
Weakly Stable Regions and Protein-Protein Interactions in Beta-Barrel Membrane Proteins
H Naveed, J Liang
Current Pharmaceutical Design, 2014
92014
Structure-based protein-protein interaction networks and drug design
H Naveed, JJ Han
Quantitative Biology, 1-9, 2013
92013
Modeling spatial population dynamics of stem cell lineage in wound healing and cancerogenesis
Y Cao, H Naveed, C Liang, J Liang
Engineering in Medicine and Biology Society, EMBC, 2013 Annual International …, 2013
92013
Mechanical Model of Geometric Cell and Topological Algorithm for Cell Dynamics from Single-Cell to Formation of Monolayered Tissues with Pattern
S Kachalo, H Naveed, Y Cao, J Zhao, J Liang
PLOS One, 2015
82015
Dynamic mechanical finite element model of biological cells for studying cellular pattern formation
J Zhao, H Naveed, S Kachalo, Y Cao, W Tian, J Liang
Engineering in Medicine and Biology Society, EMBC, 2013 Annual International …, 2013
72013
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Articles 1–20