Vladimir Sarpe
Cited by
Cited by
Mass spec studio for integrative structural biology
M Rey, V Sarpe, KM Burns, J Buse, CAH Baker, M van Dijk, L Wordeman, ...
Structure 22 (10), 1538-1548, 2014
High sensitivity crosslink detection coupled with integrative structure modeling in the mass spec studio
V Sarpe, A Rafiei, M Hepburn, N Ostan, AB Schryvers, DC Schriemer
Molecular & Cellular Proteomics 15 (9), 3071-3080, 2016
Neprosin, a selective prolyl endoprotease for bottom-up proteomics and histone mapping
CU Schräder, L Lee, M Rey, V Sarpe, P Man, S Sharma, V Zabrouskov, ...
Molecular & Cellular Proteomics 16 (6), 1162-1171, 2017
Lindsay virtual human: Multi-scale, agent-based, and interactive
C Jacob, S von Mammen, T Davison, A Sarraf-Shirazi, V Sarpe, ...
Advances in Intelligent Modelling and Simulation, 327-349, 2012
Simulating the decentralized processes of the human immune system in a virtual anatomy model
V Sarpe, C Jacob
BMC bioinformatics 14 (6), 1-18, 2013
Lactoferrin binding protein B–a bi-functional bacterial receptor protein
NKH Ostan, RH Yu, D Ng, CCL Lai, AK Pogoutse, V Sarpe, M Hepburn, ...
PLoS pathogens 13 (3), e1006244, 2017
Quantitative analysis of protein covalent labeling mass spectrometry data in the mass spec studio
DS Ziemianowicz, V Sarpe, DC Schriemer
Analytical chemistry 91 (13), 8492-8499, 2019
Supporting metabolomics with adaptable software: design architectures for the end-user
V Sarpe, DC Schriemer
Current opinion in biotechnology 43, 110-117, 2017
Swarm-based simulations for immunobiology
C Jacob, V Sarpe, C Gingras, RP Feyt
Information processing and biological systems, 29-64, 2011
Parametric evolution of a bacterial signalling system formalized by membrane computing
V Sarpe, A Esmaeili, I Yazdanbod, T Kubik, M Richter, C Jacob
IEEE Congress on Evolutionary Computation, 1-8, 2010
Optimization of swarm-based simulations
S von Mammen, A Sarraf Shirazi, V Sarpe, C Jacob
International Scholarly Research Notices 2012, 2012
HX‐MS 2 for high performance conformational analysis of complex protein states
KM Burns, V Sarpe, M Wagenbach, L Wordeman, DC Schriemer
Protein Science 24 (8), 1313-1324, 2015
Harmonizing structural mass spectrometry analyses in the mass spec studio
DS Ziemianowicz, V Sarpe, DA Crowder, TJ Pells, S Raval, M Hepburn, ...
Journal of Proteomics 225, 103844, 2020
Data processing in bottom‐up hydrogen exchange mass spectrometry
V Sarpe, DC Schriemer
Hydrogen Exchange Mass Spectrometry of Proteins: Fundamentals, Methods, and …, 2016
Improving Spectral Validation Rates in Hydrogen–Deuterium Exchange Data Analysis
S Raval, V Sarpe, M Hepburn, DA Crowder, T Zhang, R Viner, ...
Analytical Chemistry 93 (9), 4246-4254, 2021
Biological Simulation and Evolutionary Optimization: Modelling the Physiology Behind Influenza A Infection
V Sarpe
Graduate Studies, 2012
LINDSAY Virtual Human: Multi-Scale, Agent-based, and Interactive
V Sarpe
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