Lieven Clement
Lieven Clement
Associate Professor in Statistical Genomics, Ghent University
Verified email at - Homepage
Cited by
Cited by
Initial community evenness favours functionality under selective stress
L Wittebolle, M Marzorati, L Clement, A Balloi, D Daffonchio, K Heylen, ...
Nature 458 (7238), 623-626, 2009
Trajectory-based differential expression analysis for single-cell sequencing data
K Van den Berge, H Roux de Bézieux, K Street, W Saelens, R Cannoodt, ...
Nature communications 11 (1), 1201, 2020
Leaf responses to mild drought stress in natural variants of Arabidopsis
P Clauw, F Coppens, K De Beuf, S Dhondt, T Van Daele, K Maleux, ...
Plant physiology 167 (3), 800-816, 2015
Identification of novel causative genes determining the complex trait of high ethanol tolerance in yeast using pooled-segregant whole-genome sequence analysis
S Swinnen, K Schaerlaekens, T Pais, J Claesen, G Hubmann, Y Yang, ...
Genome Research, 2012
Observation weights unlock bulk RNA-seq tools for zero inflation and single-cell applications
K Van den Berge, F Perraudeau, C Soneson, MI Love, D Risso, JP Vert, ...
Genome biology 19, 1-17, 2018
Measuring the biodiversity of microbial communities by flow cytometry
R Props, P Monsieurs, M Mysara, L Clement, N Boon
Methods in Ecology and Evolution 7 (11), 1376-1385, 2016
Flow cytometry for fast microbial community fingerprinting
K De Roy, L Clement, O Thas, Y Wang, N Boon
Water research, 2011
Probabilistic index models
O Thas, JD Neve, L Clement, JP Ottoy
Journal of the Royal Statistical Society Series B: Statistical Methodology …, 2012
RNA sequencing data: hitchhiker's guide to expression analysis
K Van den Berge, KM Hembach, C Soneson, S Tiberi, L Clement, MI Love, ...
Annual Review of Biomedical Data Science 2, 139-173, 2019
stageR: a general stage-wise method for controlling the gene-level false discovery rate in differential expression and differential transcript usage
K Van den Berge, C Soneson, MD Robinson, L Clement
Genome biology 18, 1-14, 2017
Peptide-level robust ridge regression improves estimation, sensitivity, and specificity in data-dependent quantitative label-free shotgun proteomics
LJE Goeminne, K Gevaert, L Clement
Molecular & Cellular Proteomics 15 (2), 657-668, 2016
Experimental design and data-analysis in label-free quantitative LC/MS proteomics: A tutorial with MSqRob
LJE Goeminne, K Gevaert, L Clement
Journal of proteomics 171, 23-36, 2018
Faecal proteomics: A tool to investigate dysbiosis and inflammation in patients with cystic fibrosis
G Debyser, B Mesuere, L Clement, J Van de Weygaert, P Van Hecke, ...
Journal of Cystic Fibrosis 15 (2), 242-250, 2016
Daring to be differential: metabarcoding analysis of soil and plant-related microbial communities using amplicon sequence variants and operational taxonomical units
L Joos, S Beirinckx, A Haegeman, J Debode, B Vandecasteele, S Baeyen, ...
BMC genomics 21, 1-17, 2020
QTL analysis of high thermotolerance with superior and downgraded parental yeast strains reveals new minor QTLs and converges on novel causative alleles involved in RNA processing
Y Yang, MR Foulquie-Moreno, L Clement, E Erdei, A Tanghe, ...
PLoS genetics 9 (8), e1003693, 2013
A sex-inducing pheromone triggers cell cycle arrest and mate attraction in the diatom Seminavis robusta
S Moeys, J Frenkel, C Lembke, JTF Gillard, V Devos, K Van den Berge, ...
Scientific Reports 6 (1), 19252, 2016
VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering
BMP Verbist, K Thys, J Reumers, Y Wetzels, K Van der Borght, W Talloen, ...
Bioinformatics 31 (1), 94-101, 2015
Dynamics in the Strawberry Rhizosphere Microbiome in Response to Biochar and Botrytis cinerea Leaf Infection
C De Tender, A Haegeman, B Vandecasteele, L Clement, P Cremelie, ...
Frontiers in microbiology 7, 2062, 2016
moFF: a robust and automated approach to extract peptide ion intensities
A Argentini, LJE Goeminne, K Verheggen, N Hulstaert, A Staes, ...
Nature methods 13 (12), 964-966, 2016
Impact of variance components on reliability of absolute quantification using digital PCR
BKM Jacobs, E Goetghebeur, L Clement
BMC bioinformatics 15, 1-13, 2014
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