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George M. Giambasu
George M. Giambasu
Senior Scientist at Merck
Verified email at merck.com - Homepage
Title
Cited by
Cited by
Year
Amber 2021
DA Case, HM Aktulga, K Belfon, I Ben-Shalom, SR Brozell, DS Cerutti, ...
University of California, San Francisco, 2021
50622021
Role of Mg2+ in Hammerhead Ribozyme Catalysis from Molecular Simulation
TS Lee, CS López, GM Giambaşu, M Martick, WG Scott, DM York
Journal of the American Chemical Society 130 (10), 3053-3064, 2008
1312008
Force Field for Mg2+, Mn2+, Zn2+, and Cd2+ Ions That Have Balanced Interactions with Nucleic Acids
MT Panteva, GM Giambasu, DM York
The Journal of Physical Chemistry B 119 (50), 15460-15470, 2015
1142015
Ion counting from explicit-solvent simulations and 3D-RISM
GM Giambaşu, T Luchko, D Herschlag, DM York, DA Case
Biophysical journal 106 (4), 883-894, 2014
1142014
Comparison of structural, thermodynamic, kinetic and mass transport properties of Mg2+ ion models commonly used in biomolecular simulations
MT Panteva, GM Giambaşu, DM York
Journal of computational chemistry 36 (13), 970-982, 2015
952015
Cation–anion interactions within the nucleic acid ion atmosphere revealed by ion counting
M Gebala, GM Giambaşu, J Lipfert, N Bisaria, S Bonilla, G Li, DM York, ...
Journal of the American Chemical Society 137 (46), 14705-14715, 2015
702015
A variational linear-scaling framework to build practical, efficient next-generation orbital-based quantum force fields
TJ Giese, H Chen, T Dissanayake, GM Giambasu, H Heldenbrand, ...
Journal of chemical theory and computation 9 (3), 1417-1427, 2013
682013
Threshold occupancy and specific cation binding modes in the hammerhead ribozyme active site are required for active conformation
TS Lee, GM Giambaşu, CP Sosa, M Martick, WG Scott, DM York
Journal of molecular biology 388 (1), 195-206, 2009
542009
Predicting site-binding modes of ions and water to nucleic acids using molecular solvation theory
GM Giambasu, DA Case, DM York
Journal of the American Chemical Society 141 (6), 2435-2445, 2019
512019
Influence of C-5 substituted cytosine and related nucleoside analogs on the formation of benzo[a]pyrene diol epoxide-dG adducts at CG base pairs of DNA
R Guza, D Kotandeniya, K Murphy, T Dissanayake, C Lin, GM Giambasu, ...
Nucleic acids research 39 (9), 3988-4006, 2011
482011
Competitive interaction of monovalent cations with DNA from 3D-RISM
GM Giambaşu, MK Gebala, MT Panteva, T Luchko, DA Case, DM York
Nucleic acids research 43 (17), 8405-8415, 2015
452015
Evidence for the role of active site residues in the hairpin ribozyme from molecular simulations along the reaction path
H Heldenbrand, PA Janowski, G Giambaşu, TJ Giese, JE Wedekind, ...
Journal of the American Chemical Society 136 (22), 7789-7792, 2014
392014
Characterization of the structure and dynamics of the HDV ribozyme in different stages along the reaction path
TS Lee, GM Giambasu, ME Harris, DM York
The journal of physical chemistry letters 2 (20), 2538-2543, 2011
392011
Modulating RNA alignment using directional dynamic kinks: application in determining an atomic-resolution ensemble for a hairpin using NMR residual dipolar couplings
L Salmon, GM Giambasu, EN Nikolova, K Petzold, A Bhattacharya, ...
Journal of the American Chemical Society 137 (40), 12954-12965, 2015
362015
Amber 2020, 2020
DA Case, K Belfon, IY Ben-Shalom, SR Brozell, DS Cerutti, TEI Cheatham, ...
Google Scholar There is no corresponding record for this reference, 2019
302019
Structural fidelity and NMR relaxation analysis in a prototype RNA hairpin
GM Giambaşu, DM York, DA Case
RNA 21 (5), 963-974, 2015
302015
Multiscale methods for computational RNA enzymology
MT Panteva, T Dissanayake, H Chen, BK Radak, ER Kuechler, ...
Methods in enzymology 553, 335-374, 2015
272015
AMBER2020, university of California, San Fransisco
DA Case, K Belfon, IY Ben-Shalom, SR Brozell, DS Cerutti, TE Cheatham, ...
J. Amer. Chem. Soc 142, 3823-3835, 2020
262020
AMBER 2020
TA Darden, RE Duke, G Giambasu, MK Gilson, H Gohlke, AW Goetz, ...
University of California: San Francisco, 2020
202020
Bridging the gap between theory and experiment to derive a detailed understanding of hammerhead ribozyme catalysis
TS Lee, KY Wong, GM Giambasu, DM York
Progress in molecular biology and translational science 120, 25-91, 2013
132013
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