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Song Feng (馮松)
Song Feng (馮松)
Other namesSong Feng, Song Feng (冯松), 冯松
Verified email at pnnl.gov - Homepage
Title
Cited by
Cited by
Year
Cooperation in microbial communities and their biotechnological applications
M Cavaliere, S Feng, OS Soyer, JI Jiménez
Environmental microbiology 19 (8), 2949-2963, 2017
1742017
High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip
J Woo, SM Williams, LM Markillie, S Feng, CF Tsai, V Aguilera-Vazquez, ...
Nature Communications 12 (1), 6246, 2021
1122021
Hypergraph models of biological networks to identify genes critical to pathogenic viral response
S Feng, E Heath, B Jefferson, C Joslyn, H Kvinge, HD Mitchell, ...
BMC bioinformatics 22 (1), 287, 2021
742021
Impact of spatial organization on a novel auxotrophic interaction among soil microbes
X Jiang, C Zerfaß, S Feng, R Eichmann, M Asally, P Schäfer, OS Soyer
The ISME journal 12 (6), 1443-1456, 2018
602018
Three-dimensional feature matching improves coverage for single-cell proteomics based on ion mobility filtering
J Woo, GC Clair, SM Williams, S Feng, CF Tsai, RJ Moore, WB Chrisler, ...
Cell Systems 13 (5), 426-434. e4, 2022
512022
Core signalling motif displaying multistability through multi-state enzymes
S Feng, M Sáez, C Wiuf, E Feliu, OS Soyer
Journal of The Royal Society Interface 13 (123), 20160524, 2016
312016
Mass spectrometry-based direct detection of multiple types of protein thiol modifications in pancreatic beta cells under endoplasmic reticulum stress
X Li, NJ Day, S Feng, MJ Gaffrey, TD Lin, VL Paurus, ME Monroe, ...
Redox biology 46, 102111, 2021
292021
Generalizing Gillespie’s direct method to enable network-free simulations
R Suderman, ED Mitra, YT Lin, KE Erickson, S Feng, WS Hlavacek
Bulletin of mathematical biology 81 (8), 2822-2848, 2019
202019
Prediction of optimal drug schedules for controlling autophagy
A Shirin, IS Klickstein, S Feng, YT Lin, WS Hlavacek, F Sorrentino
Scientific reports 9 (1), 1428, 2019
202019
BioJazz: in silico evolution of cellular networks with unbounded complexity using rule-based modeling
S Feng, JF Ollivier, PS Swain, OS Soyer
Nucleic acids research 43 (19), e123-e123, 2015
172015
Enzyme sequestration as a tuning point in controlling response dynamics of signalling networks
S Feng, JF Ollivier, OS Soyer
PLoS computational biology 12 (5), e1004918, 2016
152016
Proteomic analysis of human lung development
G Clair, LM Bramer, R Misra, MD McGraw, S Bhattacharya, JA Kitzmiller, ...
American journal of respiratory and critical care medicine 205 (2), 208-218, 2022
122022
Defining the S-Glutathionylation Proteome by Biochemical and Mass Spectrometric Approaches
X Li, T Zhang, NJ Day, S Feng, MJ Gaffrey, WJ Qian
Antioxidants 11 (11), 2272, 2022
82022
BayesDeBulk: a flexible bayesian algorithm for the deconvolution of bulk tumor data
F Petralia, AP Calinawan, S Feng, S Gosline, P Pugliese, M Ceccarelli, ...
bioRxiv, 2021.06.25.449763, 2022
72022
Scaling methods for accelerating kinetic Monte Carlo simulations of chemical reaction networks
YT Lin, S Feng, WS Hlavacek
The Journal of chemical physics 150 (24), 244101, 2019
72019
Pan-cancer proteogenomics characterization of tumor immunity
F Petralia, W Ma, TM Yaron, FP Caruso, N Tignor, JM Wang, ...
Cell, 2024
42024
Dynamics and Sensitivity of Signaling Pathways
MA Kochen, SS Andrews, HS Wiley, S Feng, HM Sauro
Current Pathobiology Reports, 1-12, 2022
42022
Decomprolute is a benchmarking platform designed for multiomics-based tumor deconvolution
S Feng, A Calinawan, P Pugliese, P Wang, M Ceccarelli, F Petralia, ...
Cell Reports Methods 4 (2), 2024
22024
Targeted Quantification of Protein Phosphorylation and Its Contributions towards Mathematical Modeling of Signaling Pathways
PP Dakup, S Feng, T Shi, JM Jacobs, HS Wiley, WJ Qian
Molecules 28 (3), 1143, 2023
22023
SBbadger: biochemical reaction networks with definable degree distributions
MA Kochen, HS Wiley, S Feng, HM Sauro
Bioinformatics 38 (22), 5064-5072, 2022
12022
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Articles 1–20