Zizhen Yao
Cited by
Cited by
Adult mouse cortical cell taxonomy revealed by single cell transcriptomics
B Tasic, V Menon, TN Nguyen, TK Kim, T Jarsky, Z Yao, B Levi, LT Gray, ...
Nature neuroscience 19 (2), 335, 2016
Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming
Y Cao, Z Yao, D Sarkar, M Lawrence, GJ Sanchez, MH Parker, ...
Developmental cell 18 (4), 662-674, 2010
CMfinder—a covariance model based RNA motif finding algorithm
Z Yao, Z Weinberg, WL Ruzzo
Bioinformatics 22 (4), 445-452, 2006
Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline
Z Weinberg, JE Barrick, Z Yao, A Roth, JN Kim, J Gore, JX Wang, ER Lee, ...
Nucleic acids research 35 (14), 4809-4819, 2007
DUX4 activates germline genes, retroelements, and immune mediators: implications for facioscapulohumeral dystrophy
LN Geng, Z Yao, L Snider, AP Fong, JN Cech, JM Young, ...
Developmental cell 22 (1), 38-51, 2012
Shared and distinct transcriptomic cell types across neocortical areas
B Tasic, Z Yao, LT Graybuck, KA Smith, TN Nguyen, D Bertagnolli, ...
Nature 563 (7729), 72-78, 2018
Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
AB Rosenberg, CM Roco, RA Muscat, A Kuchina, P Sample, Z Yao, ...
Science 360 (6385), 176-182, 2018
Canonical genetic signatures of the adult human brain
M Hawrylycz, JA Miller, V Menon, D Feng, T Dolbeare, ...
Nature neuroscience 18 (12), 1832, 2015
Differential genomic targeting of the transcription factor TAL1 in alternate haematopoietic lineages
CG Palii, C Perez‐Iratxeta, Z Yao, Y Cao, F Dai, J Davison, H Atkins, ...
The EMBO journal 30 (3), 494-509, 2011
A widespread riboswitch candidate that controls bacterial genes involved in molybdenum cofactor and tungsten cofactor metabolism
EE Regulski, RH Moy, Z Weinberg, JE Barrick, Z Yao, WL Ruzzo, ...
Molecular microbiology 68 (4), 918-932, 2008
Fixed single-cell transcriptomic characterization of human radial glial diversity
ER Thomsen, JK Mich, Z Yao, RD Hodge, AM Doyle, S Jang, SI Shehata, ...
Nature methods 13 (1), 87-93, 2016
DUX4-induced gene expression is the major molecular signature in FSHD skeletal muscle
Z Yao, L Snider, J Balog, RJLF Lemmers, SM Van Der Maarel, R Tawil, ...
Human molecular genetics 23 (20), 5342-5352, 2014
Comparative genomics beyond sequence-based alignments: RNA structures in the ENCODE regions
E Torarinsson, Z Yao, ED Wiklund, JB Bramsen, C Hansen, J Kjems, ...
Genome research 18 (2), 242-251, 2008
The aptamer core of SAM-IV riboswitches mimics the ligand-binding site of SAM-I riboswitches
Z Weinberg, EE Regulski, MC Hammond, JE Barrick, Z Yao, WL Ruzzo, ...
Rna 14 (5), 822-828, 2008
Genetic and epigenetic determinants of neurogenesis and myogenesis
AP Fong, Z Yao, JW Zhong, Y Cao, WL Ruzzo, RC Gentleman, ...
Developmental cell 22 (4), 721-735, 2012
A computational pipeline for high-throughput discovery of cis-regulatory noncoding RNA in prokaryotes
Z Yao, J Barrick, Z Weinberg, S Neph, R Breaker, M Tompa, WL Ruzzo
PLoS computational biology 3 (7), 2007
A suite of transgenic driver and reporter mouse lines with enhanced brain-cell-type targeting and functionality
TL Daigle, L Madisen, TA Hage, MT Valley, U Knoblich, RS Larsen, ...
Cell 174 (2), 465-480. e22, 2018
DUX4 binding to retroelements creates promoters that are active in FSHD muscle and testis
JM Young, JL Whiddon, Z Yao, B Kasinathan, L Snider, LN Geng, J Balog, ...
PLoS genetics 9 (11), 2013
Intrinsic epigenetic regulation of the D4Z4 macrosatellite repeat in a transgenic mouse model for FSHD
YD Krom, PE Thijssen, JM Young, B den Hamer, J Balog, Z Yao, L Maves, ...
PLoS genetics 9 (4), 2013
Conserved cell types with divergent features in human versus mouse cortex
RD Hodge, TE Bakken, JA Miller, KA Smith, ER Barkan, LT Graybuck, ...
Nature 573 (7772), 61-68, 2019
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