Follow
Dermot Harnett
Dermot Harnett
Berlin Institute of Health
Verified email at bihealth.de
Title
Cited by
Cited by
Year
The degree of enhancer or promoter activity is reflected by the levels and directionality of eRNA transcription
O Mikhaylichenko, V Bondarenko, D Harnett, IE Schor, M Males, ...
Genes & development 32 (1), 42-57, 2018
2392018
Integrated proteogenomic deep sequencing and analytics accurately identify non-canonical peptides in tumor immunopeptidomes
C Chong, M Müller, HS Pak, D Harnett, F Huber, D Grun, M Leleu, ...
Nature communications 11 (1), 1293, 2020
2352020
Promoter shape varies across populations and affects promoter evolution and expression noise
IE Schor, JF Degner, D Harnett, E Cannavò, FP Casale, H Shim, ...
Nature genetics 49 (4), 550-558, 2017
722017
Genetic variants regulating expression levels and isoform diversity during embryogenesis
E Cannavò, N Koelling, D Harnett, D Garfield, FP Casale, L Ciglar, ...
Nature 541 (7637), 402-406, 2017
612017
Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development
H Li, A Watson, A Olechwier, M Anaya, SK Sorooshyari, DP Harnett, ...
Elife 6, e28111, 2017
432017
Protein synthesis in the developing neocortex at near-atomic resolution reveals Ebp1-mediated neuronal proteostasis at the 60S tunnel exit
ML Kraushar, F Krupp, D Harnett, P Turko, MC Ambrozkiewicz, T Sprink, ...
Molecular cell 81 (2), 304-322. e16, 2021
302021
Repression and 3D-restructuring resolves regulatory conflicts in evolutionarily rearranged genomes
AR Ringel, Q Szabo, AM Chiariello, K Chudzik, R Schöpflin, P Rothe, ...
Cell 185 (20), 3689-3704. e21, 2022
272022
Ribo-seQC: comprehensive analysis of cytoplasmic and organellar ribosome profiling data
L Calviello, D Sydow, D Harnett, U Ohler
BioRxiv, 601468, 2019
242019
A critical period of translational control during brain development at codon resolution
D Harnett, MC Ambrozkiewicz, U Zinnall, A Rusanova, E Borisova, ...
Nature Structural & Molecular Biology 29 (12), 1277-1290, 2022
232022
An exploratory investigation of brain collateral circulation plasticity after cerebral ischemia in two experimental C57BL/6 mouse models
M Foddis, K Winek, K Bentele, S Mueller, S Blumenau, N Reichhart N, ...
Journal of Cerebral Blood Flow & Metabolism 40 (2), 276-287, 2020
152020
Molecular evolution, neurodevelopmental roles and clinical significance of HECT-type UBE3 E3 ubiquitin ligases
MC Ambrozkiewicz, KJ Cuthill, D Harnett, H Kawabe, V Tarabykin
Cells 9 (11), 2455, 2020
132020
.(2020) Integrated proteogenomic deep sequencing and analytics accurately identify non-canonical peptides in tumor immunopeptidomes
C Chong, M Müller, H Pak, D Harnett, F Huber, D Grun, M Leleu, A Auger, ...
Nat. Commun 11, 1293, 0
10
Ribo-seQC: comprehensive analysis of cytoplasmic and organellar ribosome profiling data. bioRxiv 601468
L Calviello, D Sydow, D Harnett, U Ohler
82019
Integrated proteogenomic deep sequencing and analytics accurately identify noncanonical peptides in tumor immunopeptidomes. Nat Commun. 2020; 11 (1): 1293
C Chong, M Müller, HS Pak, D Harnett, F Huber, D Grun, M Leleu, ...
S41467-020-14968-9, 0
6
Promoter repression and 3D-restructuring resolves divergent developmental gene expression in TADs
AR Ringel, Q Szabo, AM Chiariello, K Chudzik, R Schöpflin, P Rothe, ...
BioRxiv, 2021.10. 08.463672, 2021
52021
Genome-wide analysis of actively translated open reading frames using RiboTaper/ORFquant
D Harnett, E Meerdink, L Calviello, D Sydow, U Ohler
Ribosome Profiling: Methods and Protocols, 331-346, 2021
32021
The architecture of protein synthesis in the developing neocortex at near-atomic resolution reveals Ebp1-mediated neuronal proteostasis at the 60S tunnel exit
ML Kraushar, F Krupp, P Turko, MC Ambrozkiewicz, T Sprink, K Imami, ...
bioRxiv, 2020.02. 08.939488, 2020
12020
Assessing the relationship between enhancer transcription and activity during embryonic development.
V Bondarenko, O Mikhaylichenko, D Harnett, I Schor, E Furlong
Biopolymers & Cell 32 (5), 2016
2016
Organizing a PhD symposium—an inside view: Setting up a scientific meeting is challenging—a PhD symposium offers its own unique opportunities and pitfalls
MS Schröder, D Harnett, BA Minke, PS Nair, ...
EMBO reports 14 (10), 856-860, 2013
2013
The system can't perform the operation now. Try again later.
Articles 1–19