| The genomic substrate for adaptive radiation in African cichlid fish D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ... Nature 513 (7518), 375-381, 2014 | 997 | 2014 |
| A high quality assembly of the Nile Tilapia (Oreochromis niloticus) genome reveals the structure of two sex determination regions MA Conte, WJ Gammerdinger, KL Bartie, DJ Penman, TD Kocher BMC genomics 18 (1), 1-19, 2017 | 199 | 2017 |
| Origin and Evolution of B Chromosomes in the Cichlid Fish Astatotilapia latifasciata Based on Integrated Genomic Analyses GT Valente, MA Conte, BEA Fantinatti, DC Cabral-de-Mello, RF Carvalho, ... Molecular biology and evolution 31 (8), 2061-2072, 2014 | 141 | 2014 |
| A high-resolution map of the Nile tilapia genome: a resource for studying cichlids and other percomorphs R Guyon, M Rakotomanga, N Azzouzi, JP Coutanceau, C Bonillo, ... BMC genomics 13 (1), 222, 2012 | 141 | 2012 |
| Chromosome-scale assemblies reveal the structural evolution of African cichlid genomes MA Conte, R Joshi, EC Moore, SP Nandamuri, WJ Gammerdinger, ... GigaScience 8 (4), giz030, 2019 | 98 | 2019 |
| Integrated analysis of miRNA and mRNA expression profiles in tilapia gonads at an early stage of sex differentiation W Tao, L Sun, H Shi, Y Cheng, D Jiang, B Fu, MA Conte, ... BMC genomics 17 (1), 1-13, 2016 | 92 | 2016 |
| An improved genome reference for the African cichlid, Metriaclima zebra MA Conte, TD Kocher BMC Genomics 16 (1), 724, 2015 | 64 | 2015 |
| Transcriptome display during tilapia sex determination and differentiation as revealed by RNA-Seq analysis W Tao, J Chen, D Tan, J Yang, L Sun, J Wei, MA Conte, TD Kocher, ... BMC genomics 19 (1), 1-12, 2018 | 62 | 2018 |
| An EST resource for tilapia based on 17 normalized libraries and assembly of 116,899 sequence tags BY Lee, A Howe, M Conte, H D'Cotta, E Pepey, JF Baroiller, F Di Palma, ... BMC genomics 11 (1), 278, 2010 | 55 | 2010 |
| Structure and decay of a proto-Y region in Tilapia, Oreochromis niloticus WJ Gammerdinger, MA Conte, EA Acquah, RB Roberts, TD Kocher BMC Genomics 15 (1), 975, 2014 | 53 | 2014 |
| A comparative recombination analysis of human coronaviruses and implications for the SARS-CoV-2 pandemic S Pollett, MA Conte, M Sanborn, RG Jarman, GM Lidl, K Modjarrad, ... Scientific reports 11 (1), 1-11, 2021 | 49 | 2021 |
| Mapping of pigmentation QTL on an anchored genome assembly of the cichlid fish, Metriaclima zebra C T O’Quin, AC Drilea, MA Conte, TD Kocher BMC genomics 14 (1), 287, 2013 | 49 | 2013 |
| Behavior-dependent cis regulation reveals genes and pathways associated with bower building in cichlid fishes RA York, C Patil, K Abdilleh, ZV Johnson, MA Conte, MJ Genner, ... Proceedings of the National Academy of Sciences 115 (47), E11081-E11090, 2018 | 47 | 2018 |
| Dynamic sequence evolution of a sex-associated B chromosome in Lake Malawi cichlid fish FE Clark, MA Conte, IA Ferreira-Bravo, AB Poletto, C Martins, TD Kocher Journal of Heredity 108 (1), 53-62, 2017 | 42 | 2017 |
| Interspecific variation in rx1 expression controls opsin expression and causes visual system diversity in african cichlid fishes JE Schulte, CS O’Brien, MA Conte, KE O’Quin, KL Carleton Molecular biology and evolution 31 (9), 2297-2308, 2014 | 40 | 2014 |
| Comparative analysis of a sex chromosome from the blackchin tilapia, Sarotherodon melanotheron WJ Gammerdinger, MA Conte, JF Baroiller, H D’cotta, TD Kocher BMC genomics 17 (1), 1-10, 2016 | 38 | 2016 |
| Diurnal variation in opsin expression and common housekeeping genes necessitates comprehensive normalization methods for quantitative real‐time PCR analyses MR Yourick, BA Sandkam, WJ Gammerdinger, D Escobar‐Camacho, ... Molecular ecology resources 19 (6), 1447-1460, 2019 | 35 | 2019 |
| Evolution of cichlid vision via trans-regulatory divergence KE O’Quin, JE Schulte, Z Patel, N Kahn, Z Naseer, H Wang, MA Conte, ... BMC evolutionary biology 12 (1), 1-11, 2012 | 34 | 2012 |
| Novel sex chromosomes in 3 Cichlid fishes from lake Tanganyika WJ Gammerdinger, MA Conte, BA Sandkam, A Ziegelbecker, ... Journal of Heredity 109 (5), 489-500, 2018 | 33 | 2018 |
| Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes K Fujimura, MA Conte, TD Kocher PLoS One 6 (12), e29477, 2011 | 33 | 2011 |
