| CIRI: an efficient and unbiased algorithm for de novo circular RNA identification Y Gao, J Wang, F Zhao Genome biology 16 (1), 4, 2015 | 479 | 2015 |
| Complete Khoisan and Bantu genomes from southern Africa SC Schuster, W Miller, A Ratan, LP Tomsho, B Giardine, LR Kasson, ... Nature 463 (7283), 943-947, 2010 | 466 | 2010 |
| Metagenome-wide analysis of antibiotic resistance genes in a large cohort of human gut microbiota Y Hu, X Yang, J Qin, N Lu, G Cheng, N Wu, Y Pan, J Li, L Zhu, X Wang, ... Nature communications 4 (1), 1-7, 2013 | 444 | 2013 |
| Gut microbiota dysbiosis contributes to the development of hypertension J Li, F Zhao, Y Wang, J Chen, J Tao, G Tian, S Wu, W Liu, Q Cui, B Geng, ... Microbiome 5 (1), 1-19, 2017 | 441 | 2017 |
| Sequencing the nuclear genome of the extinct woolly mammoth W Miller, DI Drautz, A Ratan, B Pusey, J Qi, AM Lesk, LP Tomsho, ... Nature 456 (7220), 387-390, 2008 | 349 | 2008 |
| Dysbiosis signature of fecal microbiota in colorectal cancer patients N Wu, X Yang, R Zhang, J Li, X Xiao, Y Hu, Y Chen, F Yang, N Lu, ... Microbial ecology 66 (2), 462-470, 2013 | 320 | 2013 |
| Polar and brown bear genomes reveal ancient admixture and demographic footprints of past climate change W Miller, SC Schuster, AJ Welch, A Ratan, OC Bedoya-Reina, F Zhao, ... Proceedings of the National Academy of Sciences 109 (36), E2382-E2390, 2012 | 287 | 2012 |
| Metagenomic sequencing reveals microbiota and its functional potential associated with periodontal disease J Wang, J Qi, H Zhao, S He, Y Zhang, S Wei, F Zhao Scientific reports 3 (1), 1-10, 2013 | 222 | 2013 |
| Metagenomic profile of the bacterial communities associated with Ixodes ricinus ticks G Carpi, F Cagnacci, NE Wittekindt, F Zhao, J Qi, LP Tomsho, DI Drautz, ... PloS one 6 (10), e25604, 2011 | 211 | 2011 |
| Genetic diversity and population structure of the endangered marsupial Sarcophilus harrisii (Tasmanian devil) W Miller, VM Hayes, A Ratan, DC Petersen, NE Wittekindt, J Miller, ... Proceedings of the National Academy of Sciences 108 (30), 12348-12353, 2011 | 204 | 2011 |
| Circular RNA identification based on multiple seed matching Y Gao, J Zhang, F Zhao Briefings in bioinformatics 9 (5), 803-810, 2018 | 165 | 2018 |
| Saccharina genomes provide novel insight into kelp biology N Ye, X Zhang, M Miao, X Fan, Y Zheng, D Xu, J Wang, L Zhou, D Wang, ... Nature communications 6 (1), 1-11, 2015 | 158 | 2015 |
| Establishment of a micro-particle bombardment transformation system for Dunaliella salina C Tan, S Qin, Q Zhang, P Jiang, F Zhao The Journal of Microbiology 43 (4), 361-365, 2005 | 139 | 2005 |
| Comprehensive identification of internal structure and alternative splicing events in circular RNAs Y Gao, J Wang, Y Zheng, J Zhang, S Chen, F Zhao Nature communications 7 (1), 1-13, 2016 | 137 | 2016 |
| The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus) W Miller, DI Drautz, JE Janecka, AM Lesk, A Ratan, LP Tomsho, ... Genome research 19 (2), 213-220, 2009 | 130 | 2009 |
| Comparative and Functional Genomics of Anoxygenic Green Bacteria from the Taxa Chlorobi, Chloroflexi, and Acidobacteria DA Bryant, Z Liu, T Li, F Zhao, AMG Costas, CG Klatt, DM Ward, ... Functional genomics and evolution of photosynthetic systems, 47-102, 2012 | 129 | 2012 |
| mirTools: microRNA profiling and discovery based on high-throughput sequencing E Zhu, F Zhao, G Xu, H Hou, LL Zhou, X Li, Z Sun, J Wu Nucleic acids research 38 (suppl_2), W392-W397, 2010 | 127 | 2010 |
| HTQC: a fast quality control toolkit for Illumina sequencing data X Yang, D Liu, F Liu, J Wu, J Zou, X Xiao, F Zhao, B Zhu BMC bioinformatics 14 (1), 1-4, 2013 | 121 | 2013 |
| Convergent evolution of rumen microbiomes in high-altitude mammals Z Zhang, D Xu, LI Wang, J Hao, J Wang, X Zhou, W Wang, Q Qiu, ... Current Biology 26 (14), 1873-1879, 2016 | 111 | 2016 |
| Dysbiosis of maternal and neonatal microbiota associated with gestational diabetes mellitus J Wang, J Zheng, W Shi, N Du, X Xu, Y Zhang, P Ji, F Zhang, Z Jia, ... Gut 67 (9), 1614-1625, 2018 | 102 | 2018 |
Ji QiProfessor of Computational Biology, Fudan UniversityVerified email at fudan.edu.cn
