Sadhna Phanse
Sadhna Phanse
Bioinformatician, Unversity of Toronto, University of Regina
Verified email at utoronto.ca
TitleCited byYear
A census of human soluble protein complexes
PC Havugimana, GT Hart, T Nepusz, H Yang, AL Turinsky, Z Li, PI Wang, ...
Cell 150 (5), 1068-1081, 2012
5432012
Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins
P Hu, SC Janga, M Babu, JJ Díaz-Mejía, G Butland, W Yang, O Pogoutse, ...
PLoS biology 7 (4), e1000096, 2009
3332009
eSGA: E. coli synthetic genetic array analysis
G Butland, M Babu, JJ Díaz-Mejía, F Bohdana, S Phanse, B Gold, W Yang, ...
Nature methods 5 (9), 789, 2008
2362008
A dual function of the CRISPR–Cas system in bacterial antivirus immunity and DNA repair
M Babu, N Beloglazova, R Flick, C Graham, T Skarina, B Nocek, ...
Molecular microbiology 79 (2), 484-502, 2011
2242011
Panorama of ancient metazoan macromolecular complexes
C Wan, B Borgeson, S Phanse, F Tu, K Drew, G Clark, X Xiong, O Kagan, ...
Nature 525 (7569), 339, 2015
2072015
Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae
M Babu, J Vlasblom, S Pu, X Guo, C Graham, BDM Bean, HE Burston, ...
Nature 489 (7417), 585, 2012
1892012
The binary protein-protein interaction landscape of Escherichia coli
SV Rajagopala, P Sikorski, A Kumar, R Mosca, J Vlasblom, R Arnold, ...
Nature biotechnology 32 (3), 285, 2014
1502014
Genetic interaction maps in Escherichia coli reveal functional crosstalk among cell envelope biogenesis pathways
M Babu, JJ Díaz-Mejía, J Vlasblom, A Gagarinova, S Phanse, C Graham, ...
PLoS genetics 7 (11), e1002377, 2011
802011
Quantitative genome-wide genetic interaction screens reveal global epistatic relationships of protein complexes in Escherichia coli
M Babu, R Arnold, C Bundalovic-Torma, A Gagarinova, KS Wong, ...
PLoS genetics 10 (2), e1004120, 2014
702014
Assessment of a method to characterize antibody selectivity and specificity for use in immunoprecipitation
E Marcon, H Jain, A Bhattacharya, H Guo, S Phanse, S Pu, G Byram, ...
Nature methods 12 (8), 725, 2015
662015
Bacteriome.org—an integrated protein interaction database for E. coli
C Su, JM Peregrin-Alvarez, G Butland, S Phanse, V Fong, A Emili, ...
Nucleic acids research 36 (suppl_1), D632-D636, 2007
582007
Human-chromatin-related protein interactions identify a demethylase complex required for chromosome segregation
E Marcon, Z Ni, S Pu, AL Turinsky, SS Trimble, JB Olsen, ...
Cell reports 8 (1), 297-310, 2014
412014
Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in Escherichia coli
J Vlasblom, K Zuberi, H Rodriguez, R Arnold, A Gagarinova, V Deineko, ...
Bioinformatics 31 (3), 306-310, 2014
332014
Global landscape of cell envelope protein complexes in Escherichia coli
M Babu, C Bundalovic-Torma, C Calmettes, S Phanse, Q Zhang, Y Jiang, ...
Nature biotechnology 36 (1), 103, 2018
282018
Features of the chaperone cellular network revealed through systematic interaction mapping
K Rizzolo, J Huen, A Kumar, S Phanse, J Vlasblom, Y Kakihara, ...
Cell reports 20 (11), 2735-2748, 2017
232017
Efficient prediction of human protein-protein interactions at a global scale
A Schoenrock, B Samanfar, S Pitre, M Hooshyar, K Jin, CA Phillips, ...
BMC bioinformatics 15 (1), 383, 2014
232014
Extracting high confidence protein interactions from affinity purification data: At the crossroads
S Pu, J Vlasblom, A Turinsky, E Marcon, S Phanse, SS Trimble, J Olsen, ...
Journal of proteomics 118, 63-80, 2015
212015
Mitochondrial targets for pharmacological intervention in human disease
RH Malty, M Jessulat, K Jin, G Musso, J Vlasblom, S Phanse, Z Zhang, ...
Journal of proteome research 14 (1), 5-21, 2014
212014
Conditional epistatic interaction maps reveal global functional rewiring of genome integrity pathways in Escherichia coli
A Kumar, N Beloglazova, C Bundalovic-Torma, S Phanse, V Deineko, ...
Cell reports 14 (3), 648-661, 2016
192016
NleH defines a new family of bacterial effector kinases
AM Grishin, M Cherney, DH Anderson, S Phanse, M Babu, M Cygler
Structure 22 (2), 250-259, 2014
182014
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