| A draft map of the human proteome MS Kim, SM Pinto, D Getnet, RS Nirujogi, SS Manda, R Chaerkady, ... Nature 509 (7502), 575-581, 2014 | 2432 | 2014 |
| A comprehensive map of the human urinary proteome A Marimuthu, RN O’Meally, R Chaerkady, Y Subbannayya, V Nanjappa, ... Journal of Proteome Research 10 (6), 2734-2743, 2011 | 214 | 2011 |
| Proteogenomic analysis of Mycobacterium tuberculosis by high resolution mass spectrometry DS Kelkar, D Kumar, P Kumar, L Balakrishnan, B Muthusamy, AK Yadav, ... Molecular & cellular proteomics 10 (12), 2011 | 191 | 2011 |
| Quantitative tissue proteomics of esophageal squamous cell carcinoma for novel biomarker discovery H Pawar, MK Kashyap, NA Sahasrabuddhe, S Renuse, HC Harsha, ... Cancer biology & therapy 12 (6), 510-522, 2011 | 146 | 2011 |
| SILAC‐based quantitative proteomic analysis of gastric cancer secretome A Marimuthu, Y Subbannayya, NA Sahasrabuddhe, L Balakrishnan, ... PROTEOMICS-Clinical Applications 7 (5-6), 355-366, 2013 | 77 | 2013 |
| Proteogenomic analysis of pathogenic yeast Cryptococcus neoformans using high resolution mass spectrometry LDN Selvan, JE Kaviyil, RS Nirujogi, B Muthusamy, VN Puttamallesh, ... Clinical proteomics 11 (1), 5, 2014 | 69* | 2014 |
| Annotation of the zebrafish genome through an integrated transcriptomic and proteomic analysis DS Kelkar, E Provost, R Chaerkady, B Muthusamy, SS Manda, ... Molecular & cellular proteomics 13 (11), 3184-3198, 2014 | 64 | 2014 |
| Quantitative temporal proteomic analysis of human embryonic stem cell differentiation into oligodendrocyte progenitor cells R Chaerkady, B Letzen, S Renuse, NA Sahasrabuddhe, P Kumar, AH All, ... Proteomics 11 (20), 4007-4020, 2011 | 53 | 2011 |
| A multi-omic analysis of human naïve CD4+ T cells CJ Mitchell, D Getnet, MS Kim, SS Manda, P Kumar, TC Huang, SM Pinto, ... BMC systems biology 9 (1), 1-16, 2015 | 51 | 2015 |
| Proteogenomic Analysis of Candida glabrata using High Resolution Mass Spectrometry TSK Prasad, HC Harsha, S Keerthikumar, NR Sekhar, LDN Selvan, ... Journal of proteome research 11 (1), 247-260, 2012 | 50 | 2012 |
| Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework C Blank, C Easterly, B Gruening, J Johnson, CA Kolmeder, P Kumar, ... Proteomes 6 (1), 7, 2018 | 43 | 2018 |
| Moving from unsequenced to sequenced genome: reanalysis of the proteome of Leishmania donovani RS Nirujogi, H Pawar, S Renuse, P Kumar, S Chavan, G Sathe, J Sharma, ... Journal of proteomics 97, 48-61, 2014 | 41 | 2014 |
| Quantitative proteomics for identifying biomarkers for Rabies AK Venugopal, S Ghantasala, LDN Selvan, A Mahadevan, S Renuse, ... Clinical proteomics 10 (1), 1-13, 2013 | 39 | 2013 |
| Survey of metaproteomics software tools for functional microbiome analysis R Sajulga, C Easterly, M Riffle, B Mesuere, T Muth, S Mehta, P Kumar, ... PloS one 15 (11), e0241503, 2020 | 38 | 2020 |
| MetaQuantome: An integrated, quantitative metaproteomics approach reveals connections between taxonomy and protein function in complex microbiomes CW Easterly, R Sajulga, S Mehta, J Johnson, P Kumar, S Hubler, ... Molecular & Cellular Proteomics 18 (8), S82-S91, 2019 | 34 | 2019 |
| Quantitative proteomics for identifying biomarkers for tuberculous meningitis GSS Kumar, AK Venugopal, A Mahadevan, S Renuse, HC Harsha, ... Clinical proteomics 9 (1), 1-13, 2012 | 34 | 2012 |
| Gut microbial β-glucuronidases regulate host luminal proteases and are depleted in irritable bowel syndrome AL Edwinson, L Yang, S Peters, N Hanning, P Jeraldo, P Jagtap, ... Nature Microbiology 7 (5), 680-694, 2022 | 32 | 2022 |
| An Accessible Proteogenomics Informatics Resource for Cancer Researchers MC Chambers, PD Jagtap, JE Johnson, T McGowan, P Kumar, ... Cancer research 77 (21), e43-e46, 2017 | 29 | 2017 |
| Identification of miR-145 targets through an integrated omics analysis TC Huang, S Renuse, S Pinto, P Kumar, Y Yang, R Chaerkady, B Godsey, ... Molecular bioSystems 11 (1), 197-207, 2015 | 26 | 2015 |
| A sectioning and database enrichment approach for improved peptide spectrum matching in large, genome-guided protein sequence databases P Kumar, JE Johnson, C Easterly, S Mehta, R Sajulga, B Nunn, PD Jagtap, ... Journal of proteome research 19 (7), 2772-2785, 2020 | 25 | 2020 |
