Kamran Karimi

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Peter VizeUniversity of Calgary, Alberta, CanadaVerified email at ucalgary.ca
Howard J HamiltonProfessor of Computer Science, University of ReginaVerified email at cs.uregina.ca
Aaron M ZornDivision of Developmental Biology, Cincinnati Children'sVerified email at cchmc.org
Vaneet LotayUniversity of CalgaryVerified email at ucalgary.ca
Firas HamzePrincipal Researcher, Microsoft QuantumVerified email at microsoft.com
Praneet ChaturvediBioinformatics Lead @ Division of Developmental Biology and Center for Stem Cell and OrganoidVerified email at cchmc.org
Malcolm E FisherResearch Associate, Cincinnati Children's Hospital Medical CenterVerified email at cchmc.org
Veronica HinmanProfessor Biological Sciences, Carnegie Mellon U.Verified email at cmu.edu
Saoirse FoleyPostdoctoral Researcher, Carnegie Mellon UniversityVerified email at cmu.edu
Carolyn KuUniversity of California San FranciscoVerified email at ucsf.edu
Mohammad AminD-Wave System Inc. & Simon Fraser UniversityVerified email at dwavesys.com
Paul BunykPrincipal Processor Architect, D-Wave Systems, Inc.Verified email at dwavesys.com
Thomas R BeatmanOmaha's Henry Doorly Zoo and AquariumVerified email at omahazoo.com
Daniel M WuitchikBoston UniversityVerified email at bu.edu
Martin WührLewis-Sigler Institute, Princeton UniversityVerified email at princeton.edu
Leon PeshkinHarvard Medical SchoolVerified email at hms.harvard.edu
Marc KirschnerProfessor of Systems Biology, Harvard Medical SchoolVerified email at hms.harvard.edu
Alexander A. LukyanovHarvard Medical School, Boston, United StatesVerified email at hms.harvard.edu
Gregory A Cary, PhDBioinformatics Analyst, The Jackson LaboratoryVerified email at jax.org
Jenifer CroceLaboratoire de Biologie du Développement de Villefranche-sur-Mer LBDV (UMR7009-CNRS/UPMC)Verified email at obs-vlfr.fr

Kamran Karimi

University of Calgary

Verified email at kamran-karimi.com - Homepage

High Performance Computing Operating Systems Scientific Computing Data Mining Bioinformatics


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Quantum annealing with manufactured spins MW Johnson, MHS Amin, S Gildert, T Lanting, F Hamze, N Dickson, ... Nature 473 (7346), 194-198, 2011	1654	2011
Genome evolution in the allotetraploid frog Xenopus laevis AM Session, Y Uno, T Kwon, JA Chapman, A Toyoda, S Takahashi, ... Nature 538 (7625), 336-343, 2016	757	2016
A performance comparison of CUDA and OpenCL K Karimi, NG Dickson, F Hamze arXiv preprint arXiv:1005.2581, 2010	357	2010
Experimental investigation of an eight-qubit unit cell in a superconducting optimization processor R Harris, MW Johnson, T Lanting, AJ Berkley, J Johansson, P Bunyk, ... Physical Review B 82 (2), 024511, 2010	302	2010
Thermally assisted quantum annealing of a 16-qubit problem NG Dickson, MW Johnson, MH Amin, R Harris, F Altomare, AJ Berkley, ... Nature communications 4 (1), 1903, 2013	242	2013
Xenbase: a genomic, epigenomic and transcriptomic model organism database K Karimi, JD Fortriede, VS Lotay, KA Burns, DZ Wang, ME Fisher, TJ Pells, ... Nucleic acids research 46 (D1), D861-D868, 2018	179	2018
Xenbase, the Xenopus model organism database; new virtualized system, data types and genomes JB Karpinka, JD Fortriede, KA Burns, C James-Zorn, VG Ponferrada, ... Nucleic acids research 43 (D1), D756-D763, 2015	144	2015
Xenbase: deep integration of GEO & SRA RNA-seq and ChIP-seq data in a model organism database JD Fortriede, TJ Pells, S Chu, P Chaturvedi, DZ Wang, ME Fisher, ... Nucleic Acids Research 48 (D1), D776-D782, 2020	50	2020
Xenbase: Core features, data acquisition, and data processing C James‐Zorn, VG Ponferrada, KA Burns, JD Fortriede, VS Lotay, Y Liu, ... Genesis 53 (8), 486-497, 2015	50	2015
Xenbase: Facilitating the Use of Xenopus to Model Human Disease MJ Nenni, ME Fisher, C James-Zorn, TJ Pells, V Ponferrada, S Chu, ... Frontiers in physiology 10, 154, 2019	47	2019
Importance of explicit vectorization for CPU and GPU software performance NG Dickson, K Karimi, F Hamze Journal of Computational Physics 230 (13), 5383-5398, 2011	43	2011
Generation and Interpretation of Temporal Decision Rules K Karimi, HJ Hamilton International Journal of Computer Information Systems and Industrial …, 2011	43	2011
Investigating the performance of an adiabatic quantum optimization processor K Karimi, NG Dickson, F Hamze, MHS Amin, M Drew-Brook, FA Chudak, ... Quantum Information Processing 11 (1), 77-88, 2012	41	2012
Finding temporal relations: Causal bayesian networks vs. C4. 5 K Karimi, H Hamilton Twelfth International Symposium on Methodologies for Intelligent Systems …, 2010	36	2010
The TIMERS II algorithm for the discovery of causality HJ Hamilton, K Karimi Ninth Pacific-Asia Conference on Knowledge Discovery and Data Mining, 744-750, 2005	34	2005
Systems and methods for quantum computation using real physical hardware RG Harris, G Rose, K Karimi US Patent 8,494,993, 2013	33	2013
TimeSleuth: A tool for discovering causal and temporal rules K Karimi, HJ Hamilton Fourteenth IEEE International Conference On Tools with Artificial …, 2002	30	2002
Navigating Xenbase: An Integrated Xenopus Genomics and Gene Expression Database C James-Zorn, V Ponferrada, ME Fisher, K Burns, J Fortriede, E Segerdell, ... Eukaryotic Genomic Databases: Methods and Protocols, 251-305, 2018	27	2018
High-performance physics simulations using multi-core cpus and gpgpus in a volunteer computing context K Karimi, N Dickson, F Hamze The International Journal of High Performance Computing Applications 25 (1 …, 2011	27	2011
Robust parameter selection for parallel tempering F Hamze, N Dickson, K Karimi International Journal of Modern Physics C 21 (05), 603-615, 2010	22	2010

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