Philip Mabon
Philip Mabon
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Cited by
Bioconda: sustainable and comprehensive software distribution for the life sciences
B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ...
Nature methods 15 (7), 475-476, 2018
Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa
AR Reimer, G Van Domselaar, S Stroika, M Walker, H Kent, C Tarr, ...
Emerging infectious diseases 17 (11), 2113, 2011
SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology
A Petkau, P Mabon, C Sieffert, NC Knox, J Cabral, M Iskander, M Iskander, ...
Microbial genomics 3 (6), e000116, 2017
Bacillus cereus Biovar Anthracis Causing Anthrax in Sub-Saharan Africa—Chromosomal Monophyly and Broad Geographic Distribution
KS Antonation, K Grützmacher, S Dupke, P Mabon, F Zimmermann, ...
PLoS neglected tropical diseases 10 (9), e0004923, 2016
Comparison of Sample Preparation Methods Used for the Next-Generation Sequencing of Mycobacterium tuberculosis
AD Tyler, S Christianson, NC Knox, P Mabon, J Wolfe, G Van Domselaar, ...
PLoS One 11 (2), e0148676, 2016
Correlation between Phenotypic and In Silico Detection of Antimicrobial Resistance in Salmonella enterica in Canada Using Staramr
A Bharat, A Petkau, BP Avery, JC Chen, JP Folster, CA Carson, ...
Microorganisms 10 (2), 292, 2022
Phylogenetic relationship and virulence inference of Streptococcus Anginosus Group: curated annotation and whole-genome comparative analysis support distinct species designation
AB Olson, H Kent, CD Sibley, ME Grinwis, P Mabon, C Ouellette, S Tyson, ...
BMC genomics 14, 1-23, 2013
Whole-genome sequence of livestock-associated ST398 methicillin-resistant Staphylococcus aureus isolated from humans in Canada
GR Golding, L Bryden, PN Levett, RR McDonald, A Wong, MR Graham, ...
Journal of bacteriology 194 (23), 6627-6628, 2012
A Study of the Infant Nasal Microbiome Development over the First Year of Life and in Relation to Their Primary Adult Caregivers Using cpn60 Universal Target (UT …
SW Peterson, NC Knox, GR Golding, SD Tyler, AD Tyler, P Mabon, ...
PLoS One 11 (3), e0152493, 2016
The integrated rapid infectious disease analysis (IRIDA) platform
TC Matthews, FR Bristow, EJ Griffiths, A Petkau, J Adam, D Dooley, ...
BioRxiv, 381830, 2018
Two novel toxin variants revealed by whole-genome sequencing of 175 Clostridium botulinum type E strains
KA Weedmark, DL Lambert, P Mabon, KL Hayden, CJ Urfano, D Leclair, ...
Applied and Environmental Microbiology 80 (20), 6334-6345, 2014
SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology. Microb Genom 3: e000116
A Petkau, P Mabon, C Sieffert, NC Knox, J Cabral, M Iskander, M Iskander, ...
Neptune: a bioinformatics tool for rapid discovery of genomic variation in bacterial populations
E Marinier, R Zaheer, C Berry, KA Weedmark, M Domaratzki, P Mabon, ...
Nucleic acids research 45 (18), e159-e159, 2017
Clostridium botulinum group II isolate phylogenomic profiling using whole-genome sequence data
KA Weedmark, P Mabon, KL Hayden, D Lambert, G Van Domselaar, ...
Applied and Environmental Microbiology 81 (17), 5938-5948, 2015
Sylvatic Plague in a Canadian Black-Tailed Prairie Dog (Cynomys ludovicianus)
KS Antonation, TK Shury, TK Bollinger, A Olson, P Mabon, ...
Journal of Wildlife Diseases 50 (3), 699-702, 2014
Shared genome analyses of notable listeriosis outbreaks, highlighting the critical importance of epidemiological evidence, input datasets and interpretation criteria
A Reimer, K Weedmark, A Petkau, CL Peterson, M Walker, N Knox, ...
Microbial Genomics 5 (1), e000237, 2019
DNA sequence heterogeneity of Campylobacter jejuni CJIE4 prophages and expression of prophage genes
CG Clark, PM Chong, SJ McCorrister, P Mabon, M Walker, ...
PLoS One 9 (4), e95349, 2014
Tatumella saanichensis sp. nov., isolated from a cystic fibrosis patient
DM Tracz, MW Gilmour, P Mabon, DR Beniac, L Hoang, P Kibsey, ...
International Journal of Systematic and Evolutionary Microbiology 65 (Pt_6 …, 2015
Correlation between phenotypic and in silico detection of antimicrobial resistance in Salmonella enterica in Canada using Staramr. Microorganisms 10: 292
A Bharat, A Petkau, BP Avery, JC Chen, JP Folster, CA Carson, ...
Rapid and accurate SNP genotyping of clonal bacterial pathogens with BioHansel
G Labbé, P Kruczkiewicz, J Robertson, P Mabon, J Schonfeld, D Kein, ...
Microbial Genomics 7 (9), 000651, 2021
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